RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MCFD2Q8NI22 146 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 LGALS12Q96DT0 336 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 DUSP21Q9H596 190 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PARVBQ9HBI1 364 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 NT5MQ9NPB1 228 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 OSER1Q9NX31 292 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 OTOFQ9HC10 1997 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 NCF1BA6NI72 391 aaPredicted RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 NCF1CA8MVU1 366 aaPredicted RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 H3BRB1 525 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 ARNTLO00327 626 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 ENPP3O14638 875 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 TBX1O43435 398 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 LDB2O43679 373 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 DFNA5O60443 496 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PAGE1O75459 146 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 GLP2RO95838 553 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 FTH1P02794 183 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 NCF1P14598 390 aaPredicted RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 PFKLP17858 780 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 CASP3P42574 277 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 ST13P50502 369 aaKnown RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 SLC35A2P78381 396 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PTPRCAPQ14761 206 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 TSNQ15631 228 aaKnown RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 TRIP4Q15650 581 aaPredicted RBP13.91□□□□□ -0.18
LDB3-209ENST00000623056 AAK1Q2M2I8 961 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 XKR4Q5GH76 650 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 SIRPB2Q5JXA9 342 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 ARTNQ5T4W7 220 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 AFMIDQ63HM1 303 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 ADHFE1Q8IWW8 467 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 OR8J3Q8NGG0 315 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 ACTL8Q9H568 366 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 MITFO75030 526 aaPredicted RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 SLC25A27O95847 323 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 FADS2O95864 444 aaKnown RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 PEX11BO96011 259 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 MT-ND2P03891 347 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 MMP2P08253 660 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 HOXB8P17481 243 aaPredicted RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 JUNDP17535 347 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 DSC2Q02487 901 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 ZNF181Q2M3W8 571 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 COLEC12Q5KU26 742 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 LAIR1Q6GTX8 287 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 Q6ZSR9 355 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 DCBLD1Q8N8Z6 715 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 ZNF548Q8NEK5 533 aaPredicted RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 OR10A6Q8NH74 314 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 RHBDF1Q96CC6 855 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 YME1L1Q96TA2 773 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 RHNO1Q9BSD3 238 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 ANKHQ9HCJ1 492 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 GALPQ9UBC7 116 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 CACNG4Q9UBN1 327 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 TPRKBQ9Y3C4 175 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 PCDHB14Q9Y5E9 798 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 ORC6Q9Y5N6 252 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 U3KQV3 271 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 CDC7O00311 574 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 GPR32O75388 356 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 KRT75O95678 551 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 S100BP04271 92 aaPredicted RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 ITGAMP11215 1152 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 G6PDP11413 515 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 NEK2P51955 445 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 ZC3H12BQ5HYM0 836 aaKnown RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 PAQR3Q6TCH7 311 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 GALNT5Q7Z7M9 940 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 GALNT13Q8IUC8 556 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 LILRB4Q8NHJ6 448 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 FAM162AQ96A26 154 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 ZHX1-C8orf76Q96EF9 292 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 FCRL2Q96LA5 508 aaPredicted RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 AARSD1Q9BTE6 412 aaKnown RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 DERL2Q9GZP9 239 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 KAT8Q9H7Z6 458 aaKnown RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 NEK6Q9HC98 313 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 HEBP1Q9NRV9 189 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 VAPAQ9P0L0 249 aa13.9□□□□□ -0.18
LDB3-209ENST00000623056 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 TIMM13Q9Y5L4 95 aaPredicted RBP13.9□□□□□ -0.18
LDB3-209ENST00000623056 OR4F21O95013 312 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 MLYCDO95822 493 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 CAMK2BQ13554 666 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 RFX4Q33E94 735 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
LDB3-209ENST00000623056 MRNIPQ6NTE8 343 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 CYP20A1Q6UW02 462 aa13.89□□□□□ -0.19
LDB3-209ENST00000623056 GPRIN3Q6ZVF9 776 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms