RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NTMT1Q9BV86 223 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 HDAC8Q9BY41 377 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 LMCD1Q9NZU5 365 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 THAP10Q9P2Z0 257 aaPredicted RBP16.07■□□□□ 0.16
LDB3-208ENST00000623007 TRPS1Q9UHF7 1281 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 NDUFAF1Q9Y375 327 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.07■□□□□ 0.16
LDB3-208ENST00000623007 AIM2O14862 343 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 TRIM24O15164 1050 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 ENTPD5O75356 428 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 PSMG1O95456 288 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 PRR35P0CG20 571 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 PBX2P40425 430 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 RPIAP49247 311 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 B4GALNT1Q00973 533 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 ACOX1Q15067 660 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 KIF19Q2TAC6 998 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 TMEM52BQ4KMG9 183 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 XKR7Q5GH72 579 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 TMEM198Q66K66 360 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 PRMT9Q6P2P2 845 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 VITQ6UXI7 678 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 GOLGA7Q7Z5G4 137 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 SYVN1Q86TM6 617 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 FAM9CQ8IZT9 166 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 DSELQ8IZU8 1212 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 GLMNQ92990 594 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 COQ10AQ96MF6 247 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 NSUN5Q96P11 429 aaKnown RBP16.06■□□□□ 0.16
LDB3-208ENST00000623007 TACO1Q9BSH4 297 aaKnown RBP16.06■□□□□ 0.16
LDB3-208ENST00000623007 SLC29A3Q9BZD2 475 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 CERS4Q9HA82 394 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 EBF2Q9HAK2 575 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 HPS4Q9NQG7 708 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 SDR39U1Q9NRG7 319 aaPredicted RBP16.06■□□□□ 0.16
LDB3-208ENST00000623007 POLG2Q9UHN1 485 aa16.06■□□□□ 0.16
LDB3-208ENST00000623007 EIF2B4Q9UI10 523 aaKnown RBP16.06■□□□□ 0.16
LDB3-208ENST00000623007 MUC22E2RYF6 1773 aaPredicted RBP16.06■□□□□ 0.16
LDB3-208ENST00000623007 PRRT4C9JH25 899 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 IFRD1O00458 451 aaPredicted RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 STK16O75716 305 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 SLCO2B1O94956 709 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 APODP05090 189 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 HGFP14210 728 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ITGB6P18564 788 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 HMOX2P30519 316 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 CCR7P32248 378 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 MTHFRP42898 656 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 PSMD8P48556 350 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ERVK-8P63133 956 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 MLLT1Q03111 559 aaPredicted RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 ZNF234Q14588 700 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 AGKQ53H12 422 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 RPS27LQ71UM5 84 aaKnown RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 MILR1Q7Z6M3 343 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.05■□□□□ 0.16
LDB3-208ENST00000623007 METTL6Q8TCB7 284 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 LKAAEAR1Q8TD35 194 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ASB11Q8WXH4 323 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 RIOK2Q9BVS4 552 aaKnown RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 APOL5Q9BWW9 433 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 SLC32A1Q9H598 525 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 NOL11Q9H8H0 719 aaKnown RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 IPPKQ9H8X2 491 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 TNFRSF12AQ9NP84 129 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 KLHL33A6NCF5 533 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 GRXCR2A6NFK2 248 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 MEI4A8MW99 385 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 GFYI3L273 518 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 SLC28A1O00337 649 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 AREL1O15033 823 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 NRP2O60462 931 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 RNASEH1O60930 286 aaKnown RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 ADRB3P13945 408 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 TSPAN8P19075 237 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 GJA4P35212 333 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ETV3P41162 512 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 PRLHRP49683 370 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 AGTR2P50052 363 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ITPRIPL2Q3MIP1 535 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 KHDC1Q4VXA5 237 aaKnown RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 ATP6AP1LQ52LC2 224 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 WLSQ5T9L3 541 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 TANGO2Q6ICL3 276 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 RIPOR1Q6ZS17 1223 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 UBE2R2Q712K3 238 aaPredicted RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 ERN2Q76MJ5 926 aaKnown RBP16.05■□□□□ 0.16
LDB3-208ENST00000623007 ADGRG6Q86SQ4 1221 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 PPFIBP2Q8ND30 876 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 FBXO27Q8NI29 283 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 NXPE3Q969Y0 559 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 TMEM159Q96B96 161 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 FOPNLQ96NB1 174 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ABCG8Q9H221 673 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 IGFLR1Q9H665 355 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 WDR41Q9HAD4 459 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 FBRSQ9HAH7 460 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ARL15Q9NXU5 204 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 ZIM2Q9NZV7 527 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms