RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PAOXQ6QHF9 649 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 KYQ8NBH2 561 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 PIP4K2CQ8TBX8 421 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 METTL6Q8TCB7 284 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 OR8D1Q8WZ84 308 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 SLC45A3Q96JT2 553 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 C1orf50Q9BV19 199 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 EBF2Q9HAK2 575 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 RNPEPL1Q9HAU8 725 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 IL1RL2Q9HB29 575 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 ZBTB26Q9HCK0 441 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 ARL15Q9NXU5 204 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 ADA2Q9NZK5 511 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 MBD1Q9UIS9 605 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 TRBV5-4A0A0C4DH59 114 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 KRT87PA6NCN2 255 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 NR5A2O00482 541 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 FFAR3O14843 346 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 GPR42O15529 346 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 MLYCDO95822 493 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 RPS17P08708 135 aaKnown RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 ATP1B2P14415 290 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 ZNF24P17028 368 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 CCR7P32248 378 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 CPOXP36551 454 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 CASP2P42575 452 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 CCNG1P51959 295 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 B4GALNT1Q00973 533 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 SQLEQ14534 574 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 MACC1Q6ZN28 852 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 HPS6Q86YV9 775 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 RP9Q8TA86 221 aaKnown RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 RTKNQ9BST9 563 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 MRPL1Q9BYD6 325 aaKnown RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 DLGAP2Q9P1A6 1054 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 STX16-NPEPL1H3BU86 382 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 STX16O14662 325 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 PRNPP04156 253 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 ZNF30P17039 623 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 HMOX2P30519 316 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 GDI1P31150 447 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 SEC13P55735 322 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 TSTA3Q13630 321 aaPredicted RBP9.76□□□□□ -0.85
VTA1-205ENST00000620996 GTF2H2Q13888 395 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 ZNF234Q14588 700 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 ZDHHC20Q5W0Z9 365 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 GTF2H2CQ6P1K8 395 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 SBSNQ6UWP8 590 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 C16orf89Q6UX73 402 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 VITQ6UXI7 678 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 UBE2R2Q712K3 238 aaPredicted RBP9.76□□□□□ -0.85
VTA1-205ENST00000620996 GOLGA7Q7Z5G4 137 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 CPA6Q8N4T0 437 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 ACTRT2Q8TDY3 377 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 SLC26A7Q8TE54 656 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 VOPP1Q96AW1 172 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 IPPKQ9H8X2 491 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 DZANK1Q9NVP4 752 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 OPTCQ9UBM4 332 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 TRANK1O15050 2925 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 HIST1H2AGP0C0S8 130 aaPredicted RBP9.76□□□□□ -0.85
VTA1-205ENST00000620996 HIST1H2ADP20671 130 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 GALNT1Q10472 559 aaPredicted RBP9.76□□□□□ -0.85
VTA1-205ENST00000620996 KANK2Q63ZY3 851 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 IL27RAQ6UWB1 636 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 DSELQ8IZU8 1212 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 UCMAQ8WVF2 138 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 HIST1H2AHQ96KK5 128 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 CDRT15Q96T59 188 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 HIST1H2AJQ99878 128 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 H2AFJQ9BTM1 129 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 CENPOQ9BU64 300 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 EFCAB1Q9HAE3 211 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 HPS4Q9NQG7 708 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 POLG2Q9UHN1 485 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 XIRP2A4UGR9 3374 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 A0A088AWK7 358 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 MMP20O60882 483 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 WFS1O76024 890 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 CAPN1P07384 714 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 TCF3P15923 654 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 PRDX6P30041 224 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 SOX9P48436 509 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 ABRQ12979 859 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 RUNX3Q13761 415 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 ATAT1Q5SQI0 421 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 RAET1GQ6H3X3 334 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 CES5AQ6NT32 575 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 TMEM154Q6P9G4 183 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 MILR1Q7Z6M3 343 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 GPR149Q86SP6 731 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 RAVER1Q8IY67 606 aaKnown RBP9.76□□□□□ -0.85
VTA1-205ENST00000620996 MAELQ96JY0 434 aaKnown RBP9.76□□□□□ -0.85
VTA1-205ENST00000620996 PLA2G2FQ9BZM2 168 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 C1orf21Q9H246 121 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 GDE1Q9NZC3 331 aa9.76□□□□□ -0.85
VTA1-205ENST00000620996 PPIL1Q9Y3C6 166 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms