RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 METTL2AQ96IZ6 378 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CDK15Q96Q40 435 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF768Q9H5H4 540 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 XKR8Q9H6D3 395 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 WDCPQ9H6R7 721 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ASH2LQ9UBL3 628 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 RAPGEF6Q8TEU7 1601 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ZBTB24O43167 697 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 EIF2S3P41091 472 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 VSX2P58304 361 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LRRC37A5PQ49AS3 106 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 BTLAQ7Z6A9 289 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 OR56A4Q8NGH8 313 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 OR4Q3Q8NH05 313 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TWIST2Q8WVJ9 160 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CCDC126Q96EE4 140 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TRIM54Q9BYV2 358 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ADAMTS10Q9H324 1103 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ANKEF1Q9NU02 776 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 POT1Q9NUX5 634 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PDCD5O14737 125 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 AOC1P19801 751 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ATP5F1P24539 256 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CCDC157Q569K6 752 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 RNF219Q5W0B1 726 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CNTD1Q8N815 330 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MOSPD2Q8NHP6 518 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TXLNGYQ9BZA5 131 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SLC38A7Q9NVC3 462 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C3orf18Q9UK00 162 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA31C1P0DKV0 1188 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PTPN9P43378 593 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CEACAM7Q14002 265 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 BTBD8Q5XKL5 378 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FAM110BQ8TC76 370 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 EEF1AKMT1Q8WVE0 214 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LRRC58Q96CX6 371 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MCMBPQ9BTE3 642 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 RPS6KA6Q9UK32 745 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 REREQ9P2R6 1566 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 AZIN1O14977 448 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ABCB7O75027 752 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LCKP06239 509 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SLC10A3P09131 477 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 UFM1P61960 85 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 BAATQ14032 418 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CLCA4Q14CN2 919 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C4orf46Q504U0 113 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 RBM48Q5RL73 367 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ZFPM1Q8IX07 1006 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 AP3S1Q92572 193 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ISCA1Q9BUE6 129 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ASF1BQ9NVP2 202 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 IFT52Q9Y366 437 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PCDHB12Q9Y5F1 795 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 E9PI62 339 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CD2P06729 351 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MYL3P08590 195 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LTA4HP09960 611 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF143P52747 638 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ARFIP1P53367 373 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CLINT1Q14677 625 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MAPKAPK3Q16644 382 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 VPS37AQ8NEZ2 397 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 BEST4Q8NFU0 473 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PSKH2Q96QS6 385 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TIMM13Q9Y5L4 95 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SLC12A8A0AV02 714 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C7orf72A4D263 438 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C5orf51A6NDU8 294 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 UBXN8O00124 270 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FGFBP1Q14512 234 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 BCL7AQ4VC05 210 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 GPAT3Q53EU6 434 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 GPR158Q5T848 1215 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF425Q6IV72 752 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ANKRD54Q6NXT1 300 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ILDR2Q71H61 639 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MEX3DQ86XN8 651 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LILRA2Q8N149 483 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ADAMTS16Q8TE57 1224 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 RNF167Q9H6Y7 350 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FBRSL1Q9HCM7 1045 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ATP8B3O60423 1300 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 A0A0A0MRY4 1105 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CAPN14A8MX76 684 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 INMT-MINDY4F8WBC2 141 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ENPP3O14638 875 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PGRMC2O15173 223 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LSM8O95777 96 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C2P06681 752 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CXCL8P10145 99 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 OXTRP30559 389 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 GNA13Q14344 377 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 GANABQ14697 944 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C22orf42Q6IC83 251 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SLC30A6Q6NXT4 461 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 APBB2Q92870 758 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA13Q96N96 652 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms