RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NOBOXO60393 691 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 GP5P40197 560 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 CLCNKAP51800 687 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 TAS2R39P59534 338 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 DMPKQ09013 629 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 LRP8Q14114 963 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 KIF26BQ2KJY2 2108 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 DUS1LQ6P1R4 473 aaKnown RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 DBX2Q6ZNG2 339 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 SLC35F3Q8IY50 421 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 FSTL5Q8N475 847 aaPredicted RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 KYQ8NBH2 561 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 HM13Q8TCT9 377 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 CD200R1Q8TD46 325 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 SLC44A1Q8WWI5 657 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 RMDN2Q96LZ7 410 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 DOLKQ9UPQ8 538 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 U3KQA8 63 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 FTH1P02794 183 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 ANXA6P08133 673 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 ZNF883P0CG24 379 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 MCM3P25205 808 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 MAZP56270 477 aaKnown RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 ACSBG2Q5FVE4 666 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 MROH9Q5TGP6 573 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 ALYREFQ86V81 257 aaKnown RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 GKN2Q86XP6 184 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 OR4C6Q8NH72 309 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 SETD7Q8WTS6 366 aaKnown RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 SCG3Q8WXD2 468 aaKnown RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 WWP1Q9H0M0 922 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 OR52A5Q9H2C5 316 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 VPS9D1Q9Y2B5 631 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 DNMT3AQ9Y6K1 912 aaPredicted RBP13.36□□□□□ -0.27
NEK3-210ENST00000620675 COL5A1P20908 1838 aaPredicted RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 KRT87PA6NCN2 255 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 PDZK1P1A8MUH7 402 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 E5RI56 91 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 PFDN6O15212 129 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 GPC4O75487 556 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 LIMK2P53671 638 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 OTOAQ7RTW8 1153 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 ZDHHC1Q8WTX9 485 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 CCDC68Q9H2F9 335 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 ZNF624Q9P2J8 865 aaPredicted RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 SLC39A10Q9ULF5 831 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 VWA7Q9Y334 891 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 CSNK1G3Q9Y6M4 447 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 C17orf113A0A1B0GUU1 675 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 SMIM23A6NLE4 172 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 YKT6O15498 198 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 PHGDHO43175 533 aaKnown RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 FDXRP22570 491 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 SLCO1A2P46721 670 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 PAQR3Q6TCH7 311 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 ZNF761Q86XN6 746 aaPredicted RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 CPNE9Q8IYJ1 553 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 GABPB2Q8TAK5 448 aaPredicted RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 SLC37A2Q8TED4 501 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 KCNJ9Q92806 393 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 APOLD1Q96LR9 279 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 INSM2Q96T92 566 aaPredicted RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 GPR22Q99680 433 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 UNKQ9C0B0 810 aaKnown RBP13.35□□□□□ -0.27
NEK3-210ENST00000620675 NSMCE4AQ9NXX6 385 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 NLGN3Q9NZ94 848 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 NFS1Q9Y697 457 aa13.35□□□□□ -0.27
NEK3-210ENST00000620675 NEMP2A6NFY4 417 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 QSOX1O00391 747 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 F3P13726 295 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 IDSP22304 550 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 SLC19A1P41440 591 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 DNAJC3Q13217 504 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 GBX1Q14549 363 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 IYDQ6PHW0 289 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 NAXDQ8IW45 347 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 SPATA6LQ8N4H0 392 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 MREGQ8N565 214 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 ZBTB2Q8N680 514 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 PHC3Q8NDX5 983 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 ANKRD49Q8WVL7 239 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 PANX3Q96QZ0 392 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 IKZF3Q9UKT9 509 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 DHRS7Q9Y394 339 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 ASPMQ8IZT6 3477 aa13.34□□□□□ -0.27
NEK3-210ENST00000620675 CCDC151A5D8V7 595 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms