RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ABCG4Q9H172 646 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 ANLNQ9NQW6 1124 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 PAPOLBQ9NRJ5 636 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 PHPT1Q9NRX4 125 aaPredicted RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 SPATA7Q9P0W8 599 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 PRSS38A1L453 326 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 DPPA5A6NC42 116 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 GOLGA6BA6NDN3 693 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 ERI2A8K979 691 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 C9orf172C9J069 976 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 MAGEB3O15480 346 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 ZFAND5O76080 213 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 TMCC1O94876 653 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 ANP32DO95626 131 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 ANXA6P08133 673 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 RBMS1P29558 406 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 GABREP78334 506 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 TBL3Q12788 808 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 CRYMQ14894 314 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 LRRC14Q15048 493 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 RPS6KA1Q15418 735 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 LDLRAP1Q5SW96 308 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 KIAA1324Q6UXG2 1013 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 Q6ZSR6 202 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 OR52K2Q8NGK3 314 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 CXorf40AQ8TE69 158 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 PNPLA2Q96AD5 504 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 IMP4Q96G21 291 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 DPEP2Q9H4A9 486 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 UTP6Q9NYH9 597 aaKnown RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 UBA2Q9UBT2 640 aaPredicted RBP5.32□□□□□ -1.56
CBWD3-215ENST00000619322 TRHDEQ9UKU6 1024 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 CDH23Q9H251 3354 aa5.32□□□□□ -1.56
CBWD3-215ENST00000619322 IGHV5-10-1A0A0J9YXX1 117 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 A0A0J9YYE9 177 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 A0A1W2PQM1 296 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 VSTM2BA6NLU5 285 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 LSM1O15116 133 aaKnown RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 NUAK1O60285 661 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 RAMP2O60895 175 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TRBC1P01850 177 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 NUDT17P0C025 328 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 HARSP12081 509 aaKnown RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 HRH2P25021 359 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TARDBPQ13148 414 aaKnown RBP eCLIP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 SEMA5AQ13591 1074 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 ZNF789Q5FWF6 425 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 SLC30A9Q6PML9 568 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 SPNS3Q6ZMD2 512 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 Q6ZS46 218 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 CAMKVQ8NCB2 501 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 ARRDC2Q8TBH0 407 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 CRELD1Q96HD1 420 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 VPS50Q96JG6 964 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 FICDQ9BVA6 458 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TMEM109Q9BVC6 243 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 GOLPH3Q9H4A6 298 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TMBIM4Q9HC24 238 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 PCMTD2Q9NV79 361 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 IP6K2Q9UHH9 426 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 KCND3Q9UK17 655 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 ACSL5Q9ULC5 683 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 COMMD10Q9Y6G5 202 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 CEP290O15078 2479 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 SDK2Q58EX2 2172 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 PRAMEF27A3QJZ7 478 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 MIF4GDA9UHW6 222 aaKnown RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 RASA4BC9J798 803 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TMPRSS2O15393 492 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 RASA4O43374 803 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 LEFTY1O75610 366 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 MMP2P08253 660 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 PAFAH1B1P43034 410 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 PPIAP62937 165 aaKnown RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 CDK3Q00526 305 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 KYNUQ16719 465 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 UGP2Q16851 508 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 WSCD2Q2TBF2 565 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 LRFN4Q6PJG9 635 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TMEM270Q6UE05 265 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 RINLQ6ZS11 566 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 ZSWIM9Q86XI8 627 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 LMNTD2Q8IXW0 634 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 BBS5Q8N3I7 341 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 FLVCR1-AS1Q8TAF5 88 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 UTP4Q969X6 686 aaKnown RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 TLCD1Q96CP7 247 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 PLPPR2Q96GM1 343 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 KRT12Q99456 494 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 RAB11FIP5Q9BXF6 653 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 SUDS3Q9H7L9 328 aaPredicted RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 MVB12BQ9H7P6 319 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 EPB41L5Q9HCM4 733 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 HHATLQ9HCP6 504 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 AKAP7Q9P0M2 348 aaPredicted RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 NFU1Q9UMS0 254 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 RAXQ9Y2V3 346 aa5.31□□□□□ -1.56
CBWD3-215ENST00000619322 CACNB4O00305 520 aaPredicted RBP5.31□□□□□ -1.56
CBWD3-215ENST00000619322 E2F3O00716 465 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms