RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 DUSP23Q9BVJ7 150 aa19.33■□□□□ 0.68
UPF3A-211ENST00000618700 WASH6PQ9NQA3 447 aa19.33■□□□□ 0.68
UPF3A-211ENST00000618700 LATS2Q9NRM7 1088 aa19.33■□□□□ 0.68
UPF3A-211ENST00000618700 TXNDC16Q9P2K2 825 aa19.33■□□□□ 0.68
UPF3A-211ENST00000618700 DOLKQ9UPQ8 538 aa19.33■□□□□ 0.68
UPF3A-211ENST00000618700 DMXL1Q9Y485 3027 aa19.33■□□□□ 0.68
UPF3A-211ENST00000618700 PTPRZ1P23471 2315 aaPredicted RBP19.33■□□□□ 0.68
UPF3A-211ENST00000618700 COL5A1P20908 1838 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-211ENST00000618700 GPC4O75487 556 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 FAM155BO75949 473 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 ALPPL2P10696 532 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 BRAFP15056 766 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 CD9P21926 228 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 IDSP22304 550 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 HSD17B3P37058 310 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 CLCN7P51798 805 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 CDKN2DP55273 166 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 RPA4Q13156 261 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 GBX1Q14549 363 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 UAP1L1Q3KQV9 507 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 MAP9Q49MG5 647 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 GRTP1Q5TC63 336 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 FAM45BPQ6NSW5 357 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 OGFOD3Q6PK18 319 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 EID2Q8N6I1 236 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 FAM46DQ8NEK8 389 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 ACVR1CQ8NER5 493 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 GIMAP7Q8NHV1 300 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 FAM45AQ8TCE6 357 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 UBLCP1Q8WVY7 318 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-211ENST00000618700 ATXN7L3BQ96GX2 97 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 DHRS4Q9BTZ2 278 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 PRDM8Q9NQV8 689 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 KLHL42Q9P2K6 505 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 GALPQ9UBC7 116 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 FAM8A1Q9UBU6 413 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 ACSL5Q9ULC5 683 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 CDYLQ9Y232 598 aa19.32■□□□□ 0.68
UPF3A-211ENST00000618700 ARHGEF17Q96PE2 2063 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-211ENST00000618700 CCDC151A5D8V7 595 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 NOBOXO60393 691 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 F3P13726 295 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 CHRM3P20309 590 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 PLOD1Q02809 727 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-211ENST00000618700 BOP1Q14137 746 aaKnown RBP19.31■□□□□ 0.68
UPF3A-211ENST00000618700 BRD3Q15059 726 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 SYTL3Q4VX76 610 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 HECTD2Q5U5R9 776 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 ZCCHC8Q6NZY4 707 aaKnown RBP19.31■□□□□ 0.68
UPF3A-211ENST00000618700 ABRAXAS1Q6UWZ7 409 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 NAPRTQ6XQN6 538 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 PIP4P1Q86T03 277 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 C17orf82Q86X59 251 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-211ENST00000618700 NAXDQ8IW45 347 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 SFTPA2Q8IWL1 248 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 CFAP206Q8IYR0 622 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 GPATCH11Q8N954 259 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 FAM181AQ8N9Y4 354 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 CD200R1Q8TD46 325 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 NETO1Q8TDF5 533 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 ZDHHC1Q8WTX9 485 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 FAM136AQ96C01 138 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 PAFAH2Q99487 392 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 GPR22Q99680 433 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 SLC30A3Q99726 388 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 OR52A5Q9H2C5 316 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 DPEP2Q9H4A9 486 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 FETUBQ9UGM5 382 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 WDR37Q9Y2I8 494 aa19.31■□□□□ 0.68
UPF3A-211ENST00000618700 LY6G6EA0A0G2JKS1 128 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 EXOC1LA0A1B0GW35 172 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 FAM95CA0A1B0GW59 222 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 B4DGG1 531 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 E5RI56 91 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 KPNA5O15131 536 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 SIGLEC6O43699 453 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 SNX2O60749 519 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 VPS26AO75436 327 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 APOA4P06727 396 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 FDXRP22570 491 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 RPL10P27635 214 aaKnown RBP19.3■□□□□ 0.68
UPF3A-211ENST00000618700 GCAP28676 217 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 SPRP35270 261 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-211ENST00000618700 PREPP48147 710 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 TMED2Q15363 201 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 SEPT7Q16181 437 aaKnown RBP19.3■□□□□ 0.68
UPF3A-211ENST00000618700 PLEKHS1Q5SXH7 462 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 IYDQ6PHW0 289 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 OTOAQ7RTW8 1153 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 PIM3Q86V86 326 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 SLC35F3Q8IY50 421 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 NAGSQ8N159 534 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 SFRP1Q8N474 314 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 ARL10Q8N8L6 244 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 KYQ8NBH2 561 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 GPR156Q8NFN8 814 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 BAHD1Q8TBE0 780 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-211ENST00000618700 ASZ1Q8WWH4 475 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 GLMNQ92990 594 aa19.3■□□□□ 0.68
UPF3A-211ENST00000618700 ELMO2Q96JJ3 720 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms