RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 GNRH1P01148 92 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 ADH1AP07327 375 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 CD1DP15813 335 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 ZNF37AP17032 561 aaPredicted RBP14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 STC1P52823 247 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 PRKAA2P54646 552 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 ACAP2Q15057 778 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 PGS1Q32NB8 556 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 ZIK1Q3SY52 487 aaPredicted RBP14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 ITIH5Q86UX2 942 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 AFAP1L2Q8N4X5 818 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 KREMEN2Q8NCW0 462 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 HM13Q8TCT9 377 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 PBXIP1Q96AQ6 731 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 ADI1Q9BV57 179 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 CRLS1Q9UJA2 301 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 DNAJC15Q9Y5T4 150 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 KRBA1A5PL33 1030 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 UPK3BL1B0FP48 263 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 UPK3BL2E5RIL1 263 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 OR4F21O95013 312 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 BCL10O95999 233 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 MAPKAPK2P49137 400 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 PCYT1AP49585 367 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 SLC7A2P52569 658 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 FAM45BPQ6NSW5 357 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TMEM126BQ8IUX1 230 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 OR52B6Q8NGF0 335 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 FAM45AQ8TCE6 357 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TANKQ92844 425 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 ASB9Q96DX5 294 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 ADGRE3Q9BY15 652 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 PCDHGA7Q9Y5G6 932 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 DYTNA2CJ06 578 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 MROH6A6NGR9 719 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TRPC5OSA6NMA1 111 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 GRXCR1A8MXD5 290 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TUBA4AP68366 448 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 RHDQ02161 417 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 NRG1Q02297 640 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 ZNF33AQ06730 810 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 HSPA14Q0VDF9 509 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 ZNF648Q5T619 568 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 BEND5Q7L4P6 421 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 CLHC1Q8NHS4 586 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TCEAL4Q96EI5 215 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 FEM1CQ96JP0 617 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 LINC00597Q9H2U6 94 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 TMED5Q9Y3A6 229 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 SPEGQ15772 3267 aa14.27□□□□□ -0.13
SHROOM1-208ENST00000617339 A6NL46 340 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 MRASO14807 208 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 VPS26AO75436 327 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PRAMEF1O95521 474 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 UGT2B4P06133 528 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 JAK1P23458 1154 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PRMT2P55345 433 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 DNASE1L3Q13609 305 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 SPIDRQ14159 915 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 ZNF678Q5SXM1 525 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 SLC8B1Q6J4K2 584 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 CXorf57Q6NSI4 855 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 NIPAL1Q6NVV3 410 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 SPPL2CQ8IUH8 684 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 SCML4Q8N228 414 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PARP8Q8N3A8 854 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 TWIST2Q8WVJ9 160 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PYCR2Q96C36 320 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 C19orf60Q96EN9 201 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 CWH43Q9H720 699 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 INSL5Q9Y5Q6 135 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 WDR87Q6ZQQ6 2873 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 KDELR3O43731 214 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 LAG3P18627 525 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 WASP42768 502 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 NHSL2Q5HYW2 709 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 CNKSR3Q6P9H4 555 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 GAREM2Q75VX8 874 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PIWIL3Q7Z3Z3 882 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 IGFN1Q86VF2 1251 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 DHFR2Q86XF0 187 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 CNTN4Q8IWV2 1026 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 ANKRD60Q9BZ19 345 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 GSTO2Q9H4Y5 243 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 SIAEQ9HAT2 523 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 KPNA3O00505 521 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PKMP14618 531 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PBLDP30039 288 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 HSPA7P48741 367 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 CLCQ05315 142 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 BCL2L1Q07817 233 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 PDZD8Q8NEN9 1154 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 CYB5D2Q8WUJ1 264 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 FANCEQ9HB96 536 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 ARNT2Q9HBZ2 717 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 ZFP14Q9HCL3 533 aa14.26□□□□□ -0.13
SHROOM1-208ENST00000617339 AZIN1O14977 448 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 TGM5O43548 720 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms