RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CACNG1	Q06432	222 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GTF2H2	Q13888	395 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VEPH1	Q14D04	833 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ABRAXAS2	Q15018	415 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	NANOGP8	Q6NSW7	305 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GTF2H2C	Q6P1K8	395 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CHST9	Q7L1S5	443 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GOLGA7	Q7Z5G4	137 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SPATA19	Q7Z5L4	167 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PROKR1	Q8TCW9	393 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MYO19	Q96H55	970 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TMEM175	Q9BSA9	504 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	NANOG	Q9H9S0	305 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZFYVE1	Q9HBF4	777 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZFP14	Q9HCL3	533 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ABCD2	Q9UBJ2	740 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SMIM31	A0A1B0GVY4	71 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TYW5	A2RUC4	315 aa	Known RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HOXA2	O43364	376 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VPS4B	O75351	444 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ESR1	P03372	595 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PCNA	P12004	261 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SLC2A4	P14672	509 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FAS	P25445	335 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HMOX2	P30519	316 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CCT8	P50990	548 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ERVK-8	P63133	956 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CBX3	Q13185	183 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RFTN2	Q52LD8	501 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	AARS2	Q5JTZ9	985 aa	Known RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PRMT9	Q6P2P2	845 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	BPHL	Q86WA6	291 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF786	Q8N393	782 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VPS50	Q96JG6	964 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TRIM15	Q9C019	465 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HIPK3	Q9H422	1215 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF696	Q9H7X3	374 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VCX3A	Q9NNX9	186 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SLC52A3	Q9NQ40	469 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LATS2	Q9NRM7	1088 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CREBZF	Q9NS37	354 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FARSB	Q9NSD9	589 aa	Known RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RIC8B	Q9NVN3	520 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNHIT2	Q9UHR6	403 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TMED5	Q9Y3A6	229 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CDH23	Q9H251	3354 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FAM25E	A8MYX2	175 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FFAR2	O15552	330 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FUT4	P22083	530 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZFP36L2	P47974	494 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PSMD7	P51665	324 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HMGCS1	Q01581	520 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	NOG	Q13253	232 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RCAN2	Q14206	197 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	AP5B1	Q2VPB7	878 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MILR1	Q7Z6M3	343 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	EPHX4	Q8IUS5	362 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SKA2	Q8WVK7	121 aa	Predicted RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CAPNS2	Q96L46	248 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RNF145	Q96MT1	663 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SLC2A11	Q9BYW1	496 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SMG9	Q9H0W8	520 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DUS2	Q9NX74	493 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DCAF16	Q9NXF7	216 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ACTR3B	Q9P1U1	418 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SLC4A7	Q9Y6M7	1214 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	COMMD3-BMI1	R4GMX3	469 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PLXNA4	Q9HCM2	1894 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TANC1	Q9C0D5	1861 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FOXD2	O60548	495 aa	Predicted RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RSL1D1	O76021	490 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CKM	P06732	381 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OR4D2	P58180	307 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SELPLG	Q14242	412 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PTGR1	Q14914	329 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TSPAN33	Q86UF1	283 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OFCC1	Q8IZS5	231 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TMEM199	Q8N511	208 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LIN28A	Q9H9Z2	209 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SMOX	Q9NWM0	555 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HACD3	Q9P035	362 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CRLS1	Q9UJA2	301 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LEF1	Q9UJU2	399 aa	Predicted RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CNOT11	Q9UKZ1	510 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DHRS7	Q9Y394	339 aa		13.67	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OR7A17	O14581	309 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HNRNPR	O43390	633 aa	Known RBP	13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CAPNS1	P04632	268 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HSD17B1	P14061	328 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF7	P17097	686 aa	Predicted RBP	13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HMGCL	P35914	325 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RPL38	P63173	70 aa	Known RBP	13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	BCL2L1	Q07817	233 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PHKG1	Q16816	387 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	XKR7	Q5GH72	579 aa		13.66	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms