RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ZNF490Q9ULM2 529 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ACACBO00763 2458 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 WNK2Q9Y3S1 2297 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 LOC285095A0A1B0GVY8 99 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 K7ERQ8 282 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTHFD2P13995 350 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 VARSP26640 1264 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 GATMP50440 423 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ST13P50502 369 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRKCQQ04759 706 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CSTF3Q12996 717 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 KRT33BQ14525 404 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 POM121L1PQ3SYA9 428 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 BROXQ5VW32 411 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 BLOC1S3Q6QNY0 202 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 LARP4Q71RC2 724 aaKnown RBP eCLIP5.55□□□□□ -1.521e-6■■□□□ 13.8
SYNCRIP-204ENST00000616122 NXPE1Q8N323 547 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM132CQ8N3T6 1108 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 PACRGLQ8N7B6 248 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR9Q1Q8NGQ5 310 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 RNF217Q8TC41 542 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 C2orf15Q8WU43 125 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZFAND2BQ8WV99 257 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZCCHC2Q9C0B9 1178 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTIF3Q9H2K0 278 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 RIBC2Q9H4K1 309 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF556Q9HAH1 456 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 DNAJC11Q9NVH1 559 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 KIAA1522Q9P206 1035 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 SH3GLB1Q9Y371 365 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 A0A0U1RQS6 177 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 STX16O14662 325 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 WDR47O94967 919 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CLDN7O95471 211 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 C8AP07357 584 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ABCB1P08183 1280 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 THRBP10828 461 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRPS2P11908 318 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 FDXRP22570 491 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAGEA12P43365 314 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ELMSAN1Q6PJG2 1045 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC2A7Q6PXP3 512 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 THAP5Q7Z6K1 395 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM126BQ8IUX1 230 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF557Q8N988 423 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 GPR156Q8NFN8 814 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZFP28Q8NHY6 868 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 FUBP1Q96AE4 644 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTFMTQ96DP5 389 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MRM3Q9HC36 420 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZIM2Q9NZV7 527 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMCO1Q9UM00 188 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 DMTF1Q9Y222 760 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 DHRS7Q9Y394 339 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TPRKBQ9Y3C4 175 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 PDZK1P1A8MUH7 402 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM189-UBE2V1I3L0A0 370 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 FXYD1O00168 92 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 COCHO43405 550 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CLDN9O95484 217 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 HOXC13P31276 330 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 GALK1P51570 392 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CLCN4P51793 760 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 FOXA1P55317 472 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPIDRQ14159 915 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MPPE1Q53F39 396 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 SULT1C3Q6IMI6 304 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 FBXL19Q6PCT2 694 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCDC149Q6ZUS6 474 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MINDY1Q8N5J2 469 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRPV1Q8NER1 839 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 NSMCE3Q96MG7 304 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF382Q96SR6 550 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZIC5Q96T25 663 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MIEF1Q9NQG6 463 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 DOLKQ9UPQ8 538 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 OAS3Q9Y6K5 1087 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TARM1B6A8C7 271 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MUSKO15146 869 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADAM12O43184 909 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 SCELO95171 688 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ASLP04424 464 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 NR4A1P22736 598 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCND3P30281 292 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 LSM3P62310 102 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ABRQ12979 859 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 PHKG1Q16816 387 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 RFTN2Q52LD8 501 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MANEALQ5VSG8 457 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TPGS2Q68CL5 300 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 FUNDC1Q8IVP5 155 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 AP2M1Q96CW1 435 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 IGSF21Q96ID5 467 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MUC13Q9H3R2 512 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 AIG1Q9NVV5 245 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 HCSTQ9UBK5 93 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 RIMKLBQ9ULI2 386 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ACTL7AQ9Y615 435 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 TTC36A6NLP5 189 aa5.54□□□□□ -1.52
SYNCRIP-204ENST00000616122 WASH4PA8MWX3 477 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms