RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 VPS11Q9H270 941 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 GAREM1Q9H706 876 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 IL21RQ9HBE5 538 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 TRIM39Q9HCM9 518 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 TM9SF3Q9HD45 589 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 MRPL40Q9NQ50 206 aaKnown RBP7.9□□□□□ -1.14
PCDH9-205ENST00000614931 PHPT1Q9NRX4 125 aaPredicted RBP7.9□□□□□ -1.14
PCDH9-205ENST00000614931 TM7SF3Q9NS93 570 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 MKS1Q9NXB0 559 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 SLC17A7Q9P2U7 560 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 SLC23A2Q9UGH3 650 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 TSR3Q9UJK0 312 aaKnown RBP7.9□□□□□ -1.14
PCDH9-205ENST00000614931 DMTF1Q9Y222 760 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 DHRS7Q9Y394 339 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 PLEKHM1Q9Y4G2 1056 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 ST14Q9Y5Y6 855 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 ACTL7BQ9Y614 415 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 HS3ST3A1Q9Y663 406 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 COMMD10Q9Y6G5 202 aa7.9□□□□□ -1.14
PCDH9-205ENST00000614931 NCOR2Q9Y618 2525 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SPAARA0A1B0GVQ0 90 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TMEM120BA0PK00 339 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 A6NNZ2 444 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CFAP99D6REC4 459 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 PRAMEF26H0Y7S4 382 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 PFDN6O15212 129 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 VEGFDO43915 354 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SH3BP5O60239 455 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 NUAK1O60285 661 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 VPS26AO75436 327 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SNRNP200O75643 2136 aaKnown RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CER1O95813 267 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 MPOP05164 745 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 HOXC4P09017 264 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 OR56A5P0C7T3 313 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CHRM3P20309 590 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 NR1D1P20393 614 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CRABP2P29373 138 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 ATP5DP30049 168 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 FOXC1Q12948 553 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 PDAP1Q13442 181 aaKnown RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CSHL1Q14406 222 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TEAD4Q15561 434 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 KIF19Q2TAC6 998 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 HSP90B2PQ58FF3 399 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 ACSBG2Q5FVE4 666 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 Q6ZSR6 202 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 RAPH1Q70E73 1250 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 PIWIL4Q7Z3Z4 852 aaKnown RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TRAPPC5Q8IUR0 188 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 NAXDQ8IW45 347 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CPNE9Q8IYJ1 553 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 ZBTB2Q8N680 514 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 MDM1Q8TC05 714 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 DENND1AQ8TEH3 1009 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 HEXDCQ8WVB3 486 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 EEF1AKMT1Q8WVE0 214 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 PTERQ96BW5 349 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SCARF2Q96GP6 870 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CAMK1GQ96NX5 476 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SMC6Q96SB8 1091 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TTC1Q99614 292 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SELENOSQ9BQE4 189 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SLC13A1Q9BZW2 595 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 STMN4Q9H169 189 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CCDC68Q9H2F9 335 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TCEAL2Q9H3H9 227 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 POPDC3Q9HBV1 291 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 GPAMQ9HCL2 828 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 MLXIPLQ9NP71 852 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 LATS2Q9NRM7 1088 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TAS2R13Q9NYV9 303 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TMEM216Q9P0N5 145 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SENP1Q9P0U3 644 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 FAM8A1Q9UBU6 413 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 TRMT6Q9UJA5 497 aaKnown RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SUFUQ9UMX1 484 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 RUVBL2Q9Y230 463 aaKnown RBP7.89□□□□□ -1.15
PCDH9-205ENST00000614931 CDYLQ9Y232 598 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SLC17A4Q9Y2C5 497 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 ANKRD6Q9Y2G4 727 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 PCDHGB2Q9Y5G2 931 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
PCDH9-205ENST00000614931 A0A087X1B8 175 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 SLC5A10A0PJK1 596 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PRSS38A1L453 326 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 NPEPPSL1A6NEC2 478 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PRR19A6NJB7 356 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 E5RI56 91 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CACNB4O00305 520 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CDC7O00311 574 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 COPEO14579 308 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 VILLO15195 856 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PRPF4O43172 522 aaKnown RBP eCLIP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 GRID2O43424 1007 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ZBTB14O43829 449 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CBFA2T3O75081 653 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 GLRA3O75311 464 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms