RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 RAB5CP51148 216 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 KANK2Q63ZY3 851 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 RNF44Q7L0R7 432 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 OR8K5Q8NH50 307 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 BRD7Q9NPI1 651 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 ARPC2O15144 300 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 OIP5O43482 229 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 CLK3P49761 638 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 TXNL4AP83876 142 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 CTBP1Q13363 440 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 PIGGQ5H8A4 983 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 PPM1JQ5JR12 505 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 UBE2UQ5VVX9 321 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 ASRGL1Q7L266 308 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 ADAMTS6Q9UKP5 1117 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 ZNF214Q9UL59 606 aaPredicted RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 RPH3AQ9Y2J0 694 aaPredicted RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 PAHP00439 452 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 GSTM2P28161 218 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 CDH5P33151 784 aaPredicted RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 SYT16Q17RD7 645 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 CPT1BQ92523 772 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 GTPBP3Q969Y2 492 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 TMEM209Q96SK2 561 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 SEPT5Q99719 369 aaPredicted RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 IFT27Q9BW83 186 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.59□□□□□ -0.232e-10■■■■■ 42.7
CHD1-212ENST00000614616 SALL4Q9UJQ4 1053 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 ZNF490Q9ULM2 529 aaPredicted RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 RFPL3O75679 317 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 MYF6P23409 242 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 ELK4P28324 431 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 RPL4P36578 427 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 TUBP50607 506 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 AIMP2Q13155 320 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 PTF1AQ7RTS3 328 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 FBXL20Q96IG2 436 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 SCGB3A2Q96PL1 93 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 RPF2Q9H7B2 306 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 RIIAD1A6NNX1 92 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 PTPN1P18031 435 aaKnown RBP13.59□□□□□ -0.23
CHD1-212ENST00000614616 SLC3A1Q07837 685 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 RAPSNQ13702 412 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 KLHL36Q8N4N3 616 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 OR52J3Q8NH60 311 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 PIGBQ92521 554 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
CHD1-212ENST00000614616 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
CHD1-212ENST00000614616 FGFR1P11362 822 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 PBLDP30039 288 aaPredicted RBP13.58□□□□□ -0.23
CHD1-212ENST00000614616 CD6P30203 668 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 CDKN2BP42772 138 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 ERVK-8P63133 956 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 GPR153Q6NV75 609 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 DRICH1Q6PGQ1 229 aaPredicted RBP13.58□□□□□ -0.23
CHD1-212ENST00000614616 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.23
CHD1-212ENST00000614616 Q8N402 240 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 TMBIM1Q969X1 311 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 CCDC120Q96HB5 630 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 NEDD4LQ96PU5 975 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 CLCC1Q96S66 551 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 PPIL3Q9H2H8 161 aaKnown RBP13.58□□□□□ -0.23
CHD1-212ENST00000614616 COPZ2Q9P299 210 aa13.58□□□□□ -0.23
CHD1-212ENST00000614616 FAM234BA2RU67 622 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 CHRNA1P02708 482 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 CSTF2P33240 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHD1-212ENST00000614616 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 SLC13A2Q13183 592 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 EPGNQ6UW88 154 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 C11orf65Q8NCR3 313 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 IL1RAPQ9NPH3 570 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 SCN4AP35499 1836 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 TTC34A8MYJ7 566 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 GRK5P34947 590 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 NOS2P35228 1153 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 CD86P42081 329 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 AP5B1Q2VPB7 878 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 KIAA1614Q5VZ46 1190 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 TMEM236Q5W0B7 351 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 SCIMPQ6UWF3 145 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 OOSP2Q86WS3 158 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 HID1Q8IV36 788 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 TBC1D15Q8TC07 691 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 CSGALNACT1Q8TDX6 532 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 SCRN2Q96FV2 425 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 NPAP1Q9NZP6 1156 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 VWA7Q9Y334 891 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 ERBB2P04626 1255 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 KELP23276 732 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 GPR1P46091 355 aa13.58□□□□□ -0.24
CHD1-212ENST00000614616 ANKRD54Q6NXT1 300 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms