RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SARS2Q9NP81 518 aaKnown RBP13□□□□□ -0.33
MDC1-209ENST00000613547 POT1Q9NUX5 634 aa13□□□□□ -0.33
MDC1-209ENST00000613547 IMP3Q9NV31 184 aaKnown RBP13□□□□□ -0.33
MDC1-209ENST00000613547 MOCS1Q9NZB8 636 aa13□□□□□ -0.33
MDC1-209ENST00000613547 TXNDC16Q9P2K2 825 aa13□□□□□ -0.33
MDC1-209ENST00000613547 NFU1Q9UMS0 254 aa13□□□□□ -0.33
MDC1-209ENST00000613547 PSMD13Q9UNM6 376 aa13□□□□□ -0.33
MDC1-209ENST00000613547 U3KQA8 63 aa13□□□□□ -0.33
MDC1-209ENST00000613547 LAMA1P25391 3075 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 EML2O95834 649 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 ITGB6P18564 788 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 CHRM3P20309 590 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 SSTR1P30872 391 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 FASLGP48023 281 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 CD151P48509 253 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 KRT33BQ14525 404 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 CYS1Q717R9 158 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 OTOAQ7RTW8 1153 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 GALNT7Q86SF2 657 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 SLC26A11Q86WA9 606 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 RELL1Q8IUW5 271 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 SFTPA2Q8IWL1 248 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 EIF1ADQ8N9N8 165 aaKnown RBP12.99□□□□□ -0.33
MDC1-209ENST00000613547 BIRC8Q96P09 236 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 CPNE7Q9UBL6 633 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 HEBP2Q9Y5Z4 205 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 RNF215Q9Y6U7 377 aa12.99□□□□□ -0.33
MDC1-209ENST00000613547 TCRBV9S1A1TA0A576 114 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 OR52A4PA6NMU1 304 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 IQCF5A8MTL0 148 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 VPS26AO75436 327 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 HAUS5O94927 633 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 MTHFD1P11586 935 aaKnown RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 BRAFP15056 766 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 NDUFS1P28331 727 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 CCR7P32248 378 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 GPR3P46089 330 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 PREPP48147 710 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 PPM1FP49593 454 aaPredicted RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 MPP1Q00013 466 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 HSPA14Q0VDF9 509 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 BRD3Q15059 726 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 RPE65Q16518 533 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 TTLL9Q3SXZ7 439 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 CTSL3PQ5NE16 218 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 PLEKHS1Q5SXH7 462 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 KRT222Q8N1A0 295 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 UBXN4Q92575 508 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 KCNJ9Q92806 393 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 C12orf66Q96MD2 445 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 SLC38A3Q99624 504 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 CCDC3Q9BQI4 270 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 SYNDIG1Q9H7V2 258 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 SCHIP1Q9P0W5 487 aaPredicted RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 CORO1CQ9ULV4 474 aaPredicted RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 WDR37Q9Y2I8 494 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 COLEC10Q9Y6Z7 277 aa12.98□□□□□ -0.33
MDC1-209ENST00000613547 CNOT1A5YKK6 2376 aaKnown RBP12.98□□□□□ -0.33
MDC1-209ENST00000613547 SLC5A10A0PJK1 596 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 PPM1DO15297 605 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 AHSGP02765 367 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 RPN2P04844 631 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 AOAHP28039 575 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 ALDH4A1P30038 563 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 ECHS1P30084 290 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 CSE1LP55060 971 aaKnown RBP12.97□□□□□ -0.33
MDC1-209ENST00000613547 GPX6P59796 221 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 NAB1Q13506 487 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 CLCA4Q14CN2 919 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 KYNUQ16719 465 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 ZNF658BQ4V348 819 aaPredicted RBP12.97□□□□□ -0.33
MDC1-209ENST00000613547 ZNF789Q5FWF6 425 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 PERM1Q5SV97 790 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 UGT3A1Q6NUS8 523 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 CNSTQ6PJW8 725 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 ZNF438Q7Z4V0 828 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 SLCO6A1Q86UG4 719 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 PDZD3Q86UT5 571 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 LILRA3Q8N6C8 439 aaPredicted RBP12.97□□□□□ -0.33
MDC1-209ENST00000613547 Q8N9G6 341 aaPredicted RBP12.97□□□□□ -0.33
MDC1-209ENST00000613547 SKA2Q8WVK7 121 aaPredicted RBP12.97□□□□□ -0.33
MDC1-209ENST00000613547 ADAMTS14Q8WXS8 1223 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.97□□□□□ -0.33
MDC1-209ENST00000613547 RMDN2Q96LZ7 410 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 INSM2Q96T92 566 aaPredicted RBP12.97□□□□□ -0.33
MDC1-209ENST00000613547 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 OR52A5Q9H2C5 316 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 EPB41L1Q9H4G0 881 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 KCNK4Q9NYG8 393 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 NINJ2Q9NZG7 142 aa12.97□□□□□ -0.33
MDC1-209ENST00000613547 ZNF624Q9P2J8 865 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms