RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 CEACAM20Q6UY09 585 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 SRLQ86TD4 932 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 ZSWIM9Q86XI8 627 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 APLFQ8IW19 511 aaPredicted RBP12.03□□□□□ -0.48
HLA-F-230ENST00000606273 SHISA5Q8N114 240 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.03□□□□□ -0.48
HLA-F-230ENST00000606273 OR56A4Q8NGH8 313 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 ACTL9Q8TC94 416 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 P3H4Q92791 437 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 C5orf34Q96MH7 638 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 GDAP1L1Q96MZ0 367 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 TCF12Q99081 682 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 LIN7BQ9HAP6 207 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 FGF22Q9HCT0 170 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 NT5MQ9NPB1 228 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 RPS6KL1Q9Y6S9 549 aa12.03□□□□□ -0.48
HLA-F-230ENST00000606273 ADGRG4Q8IZF6 3080 aa12.02□□□□□ -0.48
HLA-F-230ENST00000606273 IGHV1OR21-1A0A087WYE8 117 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 ARHGAP10A1A4S6 786 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 APOC4-APOC2K7ER74 178 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 PPM1DO15297 605 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
HLA-F-230ENST00000606273 DNAJB5O75953 348 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 CBX6O95503 412 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 ECEL1O95672 775 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 IGSF6O95976 241 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 JCHAINP01591 159 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 APOC2P02655 101 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 CCNB1P14635 433 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 CSF2RBP32927 897 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 DLSTP36957 453 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 NR2C2P49116 596 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 SCNN1BP51168 640 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 DSC2Q02487 901 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 NIPAL4Q0D2K0 466 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 AP1B1Q10567 949 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 WASHC5Q12768 1159 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 ZNF235Q14590 738 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 PDK1Q15118 436 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 CAMK1DQ8IU85 385 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 ESX1Q8N693 406 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 FATE1Q969F0 183 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 FUBP1Q96AE4 644 aaKnown RBP12.02□□□□□ -0.49
HLA-F-230ENST00000606273 WDR24Q96S15 920 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 DPYSL5Q9BPU6 564 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 MGME1Q9BQP7 344 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 TRIM55Q9BYV6 548 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 SLC29A3Q9BZD2 475 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 UNKQ9C0B0 810 aaKnown RBP12.02□□□□□ -0.49
HLA-F-230ENST00000606273 CLEC4MQ9H2X3 399 aaPredicted RBP12.02□□□□□ -0.49
HLA-F-230ENST00000606273 NOD2Q9HC29 1040 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 APMAPQ9HDC9 416 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 RBM22Q9NW64 420 aaKnown RBP eCLIP12.02□□□□□ -0.49
HLA-F-230ENST00000606273 ENTPD4Q9Y227 616 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 CSMD2Q7Z408 3487 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 NF1P21359 2839 aa12.02□□□□□ -0.49
HLA-F-230ENST00000606273 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.49
HLA-F-230ENST00000606273 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 TNFRSF10CO14798 259 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 ICMTO60725 284 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 PTPN3P26045 913 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 RBL1P28749 1068 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 LEPRP48357 1165 aaKnown RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 CSNK1DP48730 415 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 IFI35P80217 286 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 NSUN2Q08J23 767 aaKnown RBP eCLIP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 MTM1Q13496 603 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 MAP7Q14244 749 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 PTPRRQ15256 657 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 SIX1Q15475 284 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 TIGD7Q6NT04 549 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 NRROSQ86YC3 692 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 PLA2G15Q8NCC3 412 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 ARRDC2Q8TBH0 407 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 ATG4AQ8WYN0 398 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 QKIQ96PU8 341 aaKnown RBP eCLIP12.01□□□□□ -0.49
HLA-F-230ENST00000606273 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 CARD9Q9H257 536 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 SMARCAL1Q9NZC9 954 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 EGFL7Q9UHF1 273 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 ATP8A1Q9Y2Q0 1164 aa12.01□□□□□ -0.49
HLA-F-230ENST00000606273 A8MU76 341 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 CACNB4O00305 520 aaPredicted RBP12□□□□□ -0.49
HLA-F-230ENST00000606273 PPP1R12AO14974 1030 aaPredicted RBP12□□□□□ -0.49
HLA-F-230ENST00000606273 INPP4BO15327 924 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 TJP3O95049 919 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 RECKO95980 971 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 PCCBP05166 539 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 MMP2P08253 660 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
HLA-F-230ENST00000606273 RENBPP51606 427 aa12□□□□□ -0.49
HLA-F-230ENST00000606273 PGDP52209 483 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms