RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SPOCD1Q6ZMY3 1216 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 TMEM135Q86UB9 458 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 CNGA4Q8IV77 575 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 KATNAL2Q8IYT4 538 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 ZNF567Q8N184 647 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 SLC25A41Q8N5S1 370 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 GALNT11Q8NCW6 608 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 LRRC45Q96CN5 670 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 CALR3Q96L12 384 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 CHP1Q99653 195 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 KIR3DX1Q9H7L2 352 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 C1GALT1Q9NS00 363 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 IMP3Q9NV31 184 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 BTRCQ9Y297 605 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 AAR2Q9Y312 384 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 ALG6Q9Y672 507 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 C17orf113A0A1B0GUU1 675 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 OR2AG2A6NM03 316 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 CFAP99D6REC4 459 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 SCRG1O75711 98 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 SLC35G4P0C7Q5 338 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 UQCRFS1P47985 274 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 PGDP52209 483 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 ADCY2Q08462 1091 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 KRT33BQ14525 404 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 TAF1AQ15573 450 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 BCL7AQ4VC05 210 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 FNBP1LQ5T0N5 605 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 PAPD7Q5XG87 772 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 ZNF449Q6P9G9 518 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 TMEM126BQ8IUX1 230 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 IPMKQ8NFU5 416 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 GPR150Q8NGU9 434 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 CPT1BQ92523 772 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 ULK4Q96C45 1275 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 DCUN1D1Q96GG9 259 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 OXNAD1Q96HP4 312 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 RBM41Q96IZ5 413 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 C12orf66Q96MD2 445 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 INSM2Q96T92 566 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 SLC25A23Q9BV35 468 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 ACSS2Q9NR19 701 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 SAE1Q9UBE0 346 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 RSPH14Q9UHP6 348 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 FEZ2Q9UHY8 353 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 SLC24A2Q9UI40 661 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 PSMD13Q9UNM6 376 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 EFR3BQ9Y2G0 817 aa17.38■□□□□ 0.37
SHKBP1-227ENST00000602011 TTLL8A6PVC2 850 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 AGAP14A8MT82 685 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 TIAF1O95411 115 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 PRAMEF1O95521 474 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 CRTAMO95727 393 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 EBLN1P0CF75 366 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 TNNT1P13805 278 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 COPS2P61201 443 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 PRPSAP1Q14558 356 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 GSE1Q14687 1217 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 KAZNQ674X7 775 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 CAPRIN2Q6IMN6 1127 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 FAM83HQ6ZRV2 1179 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 ZC3H18Q86VM9 953 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 VSTM4Q8IW00 320 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 MR1Q95460 341 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 ZNF501Q96CX3 271 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 QKIQ96PU8 341 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 DPH2Q9BQC3 489 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 ASB8Q9H765 288 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 LRRC4CQ9HCJ2 640 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 SPTLC3Q9NUV7 552 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 ZNF451Q9Y4E5 1061 aa17.37■□□□□ 0.37
SHKBP1-227ENST00000602011 hCG_1818297A0A087WSY0 165 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 OR6C74A6NCV1 312 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 MFAP3LO75121 409 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 SRP72O76094 671 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 CD63P08962 238 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 GSTM1P09488 218 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 PECAM1P16284 738 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 HADHAP40939 763 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 CHRNA4P43681 627 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 CD151P48509 253 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 GSTM4Q03013 218 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 KCNAB1Q14722 419 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 FAM182AQ5T1J6 154 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 RANBP10Q6VN20 620 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 BBS12Q6ZW61 710 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 B4GALNT4Q76KP1 1039 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 ACVR1CQ8NER5 493 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 NLNQ9BYT8 704 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 WWP1Q9H0M0 922 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 ING2Q9H160 280 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 VPS37BQ9H9H4 285 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 LUC7LQ9NQ29 371 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 SERTAD3Q9UJW9 196 aa17.36■□□□□ 0.37
SHKBP1-227ENST00000602011 APOC4-APOC2K7ER74 178 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 MEN1O00255 615 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 KLHL41O60662 606 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 STK10O94804 968 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms