RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ETS1P14921 441 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 FDFT1P37268 417 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 PRLHRP49683 370 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 CACNG1Q06432 222 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 SEPT6Q14141 434 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 IL11RAQ14626 422 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 GSE1Q14687 1217 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 TBR1Q16650 682 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 SKIDA1Q1XH10 827 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 ZNF662Q6ZS27 426 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 PRUNE1Q86TP1 453 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 LRRC8AQ8IWT6 810 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 PIANPQ8IYJ0 282 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 OR6C1Q96RD1 312 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 ARHGAP9Q9BRR9 750 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 TRIT1Q9H3H1 467 aaKnown RBP14.72□□□□□ -0.05
LIG1-215ENST00000597901 LZTFL1Q9NQ48 299 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 HRASLS2Q9NWW9 162 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 COLEC10Q9Y6Z7 277 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 LOC400499M0QZD8 3231 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 AHCTF1Q8WYP5 2266 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 IGHV5-51A0A0C4DH38 117 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 LOC101059948A0A1B0GTJ6 334 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 CCDC78A2IDD5 438 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 SUN1O94901 812 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 CCDC175P0C221 793 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 SLC35G4P0C7Q5 338 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 ZNF28P17035 718 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 NELFEP18615 380 aaKnown RBP14.71□□□□□ -0.05
LIG1-215ENST00000597901 ACRV1P26436 265 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 GRIA1P42261 906 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 LMAN1P49257 510 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 PPP1CAP62136 330 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 CDH17Q12864 832 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 KRT33BQ14525 404 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 PLCL1Q15111 1095 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 CCNG2Q16589 344 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 CCDC38Q502W7 563 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 DUS1LQ6P1R4 473 aaKnown RBP14.71□□□□□ -0.05
LIG1-215ENST00000597901 CLDN19Q8N6F1 224 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 DNAAF3Q8N9W5 541 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 HM13Q8TCT9 377 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 UBXN4Q92575 508 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 ELMO2Q96JJ3 720 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 RMDN2Q96LZ7 410 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 SLC24A2Q9UI40 661 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 DRG1Q9Y295 367 aaKnown RBP14.71□□□□□ -0.05
LIG1-215ENST00000597901 MGAQ8IWI9 3026 aa14.71□□□□□ -0.05
LIG1-215ENST00000597901 OR6C74A6NCV1 312 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 OR5K3A6NET4 321 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 E7EVH7 732 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 DLGAP3O95886 979 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 FGF5P12034 268 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 PLA2G2AP14555 144 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 ABHD18Q0P651 414 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 SIX1Q15475 284 aaPredicted RBP14.7□□□□□ -0.06
LIG1-215ENST00000597901 DBN1Q16643 649 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 ZNF658BQ4V348 819 aaPredicted RBP14.7□□□□□ -0.06
LIG1-215ENST00000597901 RASGRP3Q8IV61 690 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 UNC5BQ8IZJ1 945 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 PHC3Q8NDX5 983 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 OR4E2Q8NGC2 313 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 RNF31Q96EP0 1072 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 SLC45A3Q96JT2 553 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 SLC41A2Q96JW4 573 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 FERD3LQ96RJ6 166 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 MAP3K3Q99759 626 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 KIR3DX1Q9H7L2 352 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 COG4Q9H9E3 785 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 GPN2Q9H9Y4 310 aaPredicted RBP14.7□□□□□ -0.06
LIG1-215ENST00000597901 RAB6BQ9NRW1 208 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 HEBP2Q9Y5Z4 205 aa14.7□□□□□ -0.06
LIG1-215ENST00000597901 ZFC3H1O60293 1989 aaKnown RBP14.7□□□□□ -0.06
LIG1-215ENST00000597901 FASNP49327 2511 aaKnown RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 UBA6A0AVT1 1052 aaPredicted RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 CCDC162PA2VCL2 907 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 OR51F1A6NGY5 319 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 NKX2-8O15522 239 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 SPAG6O75602 509 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 AP2A2O94973 939 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 GAS8O95995 478 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 ZSCAN5DPP0CG00 497 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 FOLR1P15328 257 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 ADRA1DP25100 572 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 MSNP26038 577 aaKnown RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 NDUFS1P28331 727 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 PDHA2P29803 388 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 RPL22P35268 128 aaKnown RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 CD151P48509 253 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 SEMA5AQ13591 1074 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 LAMB3Q13751 1172 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 MAP7Q14244 749 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 DNTTIP2Q5QJE6 756 aaKnown RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 ARMC6Q6NXE6 501 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 ZNF449Q6P9G9 518 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 C6orf15Q6UXA7 325 aaPredicted RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 PPP1R21Q6ZMI0 780 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 ESX1Q8N693 406 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 GLIS1Q8NBF1 620 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms