RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 SLC5A10A0PJK1 596 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 WDR91A4D1P6 747 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 H3BM21 787 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 ZBTB14O43829 449 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 SNX2O60749 519 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 TRIM13O60858 407 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 KERAO60938 352 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 LILRB5O75023 590 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 TSPAN12O95859 305 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 TOP3BO95985 862 aaKnown RBP14.96□□□□□ -0.01
TRIM28-209ENST00000597423 GRK2P25098 689 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 PBLDP30039 288 aaPredicted RBP14.96□□□□□ -0.01
TRIM28-209ENST00000597423 CNR2P34972 360 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 GNGT1P63211 74 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 RACK1P63244 317 aaKnown RBP14.96□□□□□ -0.01
TRIM28-209ENST00000597423 GBX1Q14549 363 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 PDK4Q16654 411 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 TECRLQ5HYJ1 363 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 CYHR1Q6ZMK1 362 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 ZNF547Q8IVP9 402 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 OXR1Q8N573 874 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 NAT14Q8WUY8 206 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
TRIM28-209ENST00000597423 CCDC134Q9H6E4 229 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 MANSC1Q9H8J5 431 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 EBF2Q9HAK2 575 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 KLQ9UEF7 1012 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 GPSM3Q9Y4H4 160 aa14.96□□□□□ -0.01
TRIM28-209ENST00000597423 PRSS38A1L453 326 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 TMEM202A6NGA9 273 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 TNFP01375 233 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 ENO2P09104 434 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 THEGLP0DJG4 465 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 MAP4P27816 1152 aaKnown RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 CD38P28907 300 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 GMPRP36959 345 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 GNPDA1P46926 289 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 BLKP51451 505 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 SRP54P61011 504 aaKnown RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 NAA20P61599 178 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 SP140Q13342 867 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 LRP8Q14114 963 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 TSNQ15631 228 aaKnown RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 PYCR3Q53H96 274 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 CDKL4Q5MAI5 379 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 TTC23LQ6PF05 361 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 TSSK4Q6SA08 328 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 PIWIL4Q7Z3Z4 852 aaKnown RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 SLC22A15Q8IZD6 547 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 RGL4Q8IZJ4 473 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 DEFB119Q8N690 84 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 MAGEC3Q8TD91 643 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 MCOLN3Q8TDD5 553 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 HSPA12BQ96MM6 686 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 MIR1-1HGQ9H1L0 117 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 COG4Q9H9E3 785 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 CARS2Q9HA77 564 aaKnown RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 EIF2B4Q9UI10 523 aaKnown RBP14.95□□□□□ -0.02
TRIM28-209ENST00000597423 SUFUQ9UMX1 484 aa14.95□□□□□ -0.02
TRIM28-209ENST00000597423 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 NPEPPSL1A6NEC2 478 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 SRRM3A6NNA2 597 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-209ENST00000597423 PRR5-ARHGAP8B1AHC4 643 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 TARM1B6A8C7 271 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 G3V2L1 256 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 TK2O00142 265 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 CDC7O00311 574 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 IFRD1O00458 451 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-209ENST00000597423 KLF11O14901 512 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 SNUPNO95149 360 aaKnown RBP14.94□□□□□ -0.02
TRIM28-209ENST00000597423 RASGRP1O95267 797 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 CATP04040 527 aaKnown RBP14.94□□□□□ -0.02
TRIM28-209ENST00000597423 RPN2P04844 631 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 GFAPP14136 432 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 CYP2A7P20853 494 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 IDSP22304 550 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 ALDH3A1P30838 453 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 DNAJB13P59910 316 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 CBX1P83916 185 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 DMPKQ09013 629 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 DMWDQ09019 674 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 ABRQ12979 859 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 STX3Q13277 289 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 TEAD4Q15561 434 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 OR4D1Q15615 310 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 CFAP157Q5JU67 520 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 LIPMQ5VYY2 423 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 METRNLQ641Q3 311 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 NAPRTQ6XQN6 538 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 RGS9BPQ6ZS82 235 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 CHST15Q7LFX5 561 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-209ENST00000597423 C10orf107Q8IVU9 208 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 TMEFF1Q8IYR6 380 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 TMEM151AQ8N4L1 468 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 TMEM105Q8N8V8 129 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 OR13H1Q8NG92 308 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 GAB3Q8WWW8 586 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 ASB11Q8WXH4 323 aa14.94□□□□□ -0.02
TRIM28-209ENST00000597423 DNASE2BQ8WZ79 361 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms