RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 INSM2Q96T92 566 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 ERP44Q9BS26 406 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 CCDC86Q9H6F5 360 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 COG4Q9H9E3 785 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 EPB41L5Q9HCM4 733 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SARS2Q9NP81 518 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 ACSL5Q9ULC5 683 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 CHMP2BQ9UQN3 213 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 UTP11Q9Y3A2 253 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 AK5Q9Y6K8 562 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 COL27A1Q8IZC6 1860 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 PIKFYVEQ9Y2I7 2098 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 LOC400499M0QZD8 3231 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 IGHV1OR21-1A0A087WYE8 117 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 TRABD2BA6NFA1 517 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 A8MU76 341 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 F8W8V4 182 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 QSOX1O00391 747 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PFDN6O15212 129 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 TCEA3O75764 348 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 CAPNS1P04632 268 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 TYRP1P17643 537 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 AMD1P17707 334 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PGAM1P18669 254 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 ARNTP27540 789 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 CD1CP29017 333 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PDHA2P29803 388 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 ELK3P41970 407 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 MAGEA3P43357 314 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 GPR3P46089 330 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 FASLGP48023 281 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 SLC7A5Q01650 507 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PDIA2Q13087 525 aaKnown RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 LONRF1Q17RB8 773 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 ISXQ2M1V0 245 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PHF19Q5T6S3 580 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 AGAP9Q5VTM2 703 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 NEPROQ6NW34 567 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 WASH2PQ6VEQ5 465 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PACS1Q6VY07 963 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 B3GNT8Q7Z7M8 397 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PROSER1Q86XN7 944 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 UNC5BQ8IZJ1 945 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 DCBLD1Q8N8Z6 715 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
LIG1-211ENST00000596457 BBOF1Q8ND07 529 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PHC3Q8NDX5 983 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 SPDYE1Q8NFV5 336 aaPredicted RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 GPR150Q8NGU9 434 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 OR10G6Q8NH81 332 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 SGSM3Q96HU1 749 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 FERD3LQ96RJ6 166 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 EBNA1BP2Q99848 306 aaKnown RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 PPANQ9NQ55 473 aaKnown RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 WASH6PQ9NQA3 447 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 FBXO6Q9NRD1 293 aaPredicted RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 IARS2Q9NSE4 1012 aaKnown RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 KLHL3Q9UH77 587 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 TSR3Q9UJK0 312 aaKnown RBP10.85□□□□□ -0.67
LIG1-211ENST00000596457 CRYL1Q9Y2S2 319 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 ENTPD2Q9Y5L3 495 aa10.85□□□□□ -0.67
LIG1-211ENST00000596457 ASXL3Q9C0F0 2248 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 ZCWPW2A0A1B0GU75 182 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 C17orf113A0A1B0GUU1 675 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 KLHL33A6NCF5 533 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 PRR19A6NJB7 356 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 D6RAR5 112 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 SMAPO00193 183 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
LIG1-211ENST00000596457 PRMT5O14744 637 aaPredicted RBP10.84□□□□□ -0.67
LIG1-211ENST00000596457 USP1O94782 785 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 ERVK-10P10266 1014 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 ARCN1P48444 511 aaKnown RBP10.84□□□□□ -0.67
LIG1-211ENST00000596457 INHBCP55103 352 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 UBE2IP63279 158 aaKnown RBP10.84□□□□□ -0.67
LIG1-211ENST00000596457 CYP4F3Q08477 520 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 CTBP1Q13363 440 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 GPR18Q14330 331 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 PLCL1Q15111 1095 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 HIF1AQ16665 826 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 SOWAHCQ53LP3 525 aaPredicted RBP10.84□□□□□ -0.67
LIG1-211ENST00000596457 C3orf38Q5JPI3 329 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 ZNF470Q6ECI4 717 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 C8orf74Q6P047 294 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 CAPN12Q6ZSI9 719 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 TMEM26Q6ZUK4 368 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 ZNF572Q7Z3I7 529 aaPredicted RBP10.84□□□□□ -0.67
LIG1-211ENST00000596457 TMPRSS9Q7Z410 1059 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 TMEM135Q86UB9 458 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 KCNMB4Q86W47 210 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 IGDCC3Q8IVU1 814 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 DENND6AQ8IWF6 608 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 AVL9Q8NBF6 648 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 MDM1Q8TC05 714 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 LKAAEAR1Q8TD35 194 aa10.84□□□□□ -0.67
LIG1-211ENST00000596457 FAM136AQ96C01 138 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms