RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PIH1D1Q9NWS0 290 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 OGFRQ9NZT2 677 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 K7ENP7 123 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 ERVH48-1M5A8F1 160 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TK2O00142 265 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 AGRPO00253 132 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 IFRD1O00458 451 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 CAPN5O15484 640 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 FTH1P02794 183 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TYRP1P17643 537 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 CD151P48509 253 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 BASP1P80723 227 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 PLOD1Q02809 727 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 ACVR1Q04771 509 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 KRT33BQ14525 404 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 GSE1Q14687 1217 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 MANEAQ5SRI9 462 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TSTD2Q5T7W7 516 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 INO80CQ6PI98 192 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 CARFQ8N187 725 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 ZSCAN1Q8NBB4 408 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 GPR150Q8NGU9 434 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 UBXN4Q92575 508 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 SGSM3Q96HU1 749 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TGM7Q96PF1 710 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TSSK1BQ9BXA7 367 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 IL22Q9GZX6 179 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 KIR3DX1Q9H7L2 352 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 COG4Q9H9E3 785 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 CPNE5Q9HCH3 593 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 OCIAD1Q9NX40 245 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 KLHL3Q9UH77 587 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TTC7AQ9ULT0 858 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 TCAF1Q9Y4C2 921 aa17.34■□□□□ 0.37
SHKBP1-204ENST00000594862 EIF4E1BA6NMX2 242 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 MATN2O00339 956 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 LIN7AO14910 233 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 RASSF9O75901 435 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 ETS1P14921 441 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 TPSB2P20231 275 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 CXCR5P32302 372 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 FOXN2P32314 431 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 GFERP55789 205 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 PRAMEP78395 509 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 SARNPP82979 210 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 TPSAB1Q15661 275 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 DBN1Q16643 649 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 CCDC38Q502W7 563 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 PCID2Q5JVF3 399 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 ARHGAP40Q5TG30 622 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 CAPRIN2Q6IMN6 1127 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 OOSP2Q86WS3 158 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 ZFAND4Q86XD8 727 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 KMT5CQ86Y97 462 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 RASGEF1CQ8N431 466 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 OR13J1Q8NGT2 312 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 RSC1A1Q92681 617 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 WBP1Q96G27 269 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 INSM2Q96T92 566 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 TRIT1Q9H3H1 467 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 SMARCAL1Q9NZC9 954 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 BFARQ9NZS9 450 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 FAM8A1Q9UBU6 413 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 ANAPC5Q9UJX4 755 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 B3GALT1Q9Y5Z6 326 aa17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 SETXQ7Z333 2677 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-204ENST00000594862 KALRNO60229 2985 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 CCDC162PA2VCL2 907 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 POLR1CO15160 346 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 ATXN7O15265 892 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 KIF5CO60282 957 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 OR56A5P0C7T3 313 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 NPY2RP49146 381 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 ARSDP51689 593 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 IL11RAQ14626 422 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 FASTKD1Q53R41 847 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 ANKS6Q68DC2 871 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 ARMC6Q6NXE6 501 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 IRGCQ6NXR0 463 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 PIANPQ8IYJ0 282 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 PRELID2Q8N945 189 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 GLIS1Q8NBF1 620 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 ACVR1CQ8NER5 493 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 HDAC10Q969S8 669 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 RMDN2Q96LZ7 410 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 MVB12BQ9H7P6 319 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 WDR70Q9NW82 654 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 SIDT1Q9NXL6 827 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 SLC24A2Q9UI40 661 aa17.32■□□□□ 0.36
SHKBP1-204ENST00000594862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 GOLGA6L10A0A0M3HER8 536 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 OR5K3A6NET4 321 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 TLCD2A6NGC4 264 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 PGRMC1O00264 195 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 POLBP06746 335 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 ZSCAN5DPP0CG00 497 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 GRIA1P42261 906 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 CDKN1CP49918 316 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 PRKAA1Q13131 559 aa17.31■□□□□ 0.36
SHKBP1-204ENST00000594862 CACHD1Q5VU97 1274 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms