RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 AGAP9Q5VTM2 703 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 NEK10Q6ZWH5 1172 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 RAPH1Q70E73 1250 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 TAF8Q7Z7C8 310 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 LCA5Q86VQ0 697 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 OR2W6PQ8NHA6 318 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 ACMSDQ8TDX5 336 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 ISL2Q96A47 359 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 CCDC97Q96F63 343 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-214ENST00000592186 PGM2Q96G03 612 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 GPR21Q99679 349 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 RASSF4Q9H2L5 321 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 COG4Q9H9E3 785 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 SARS2Q9NP81 518 aaKnown RBP10.47□□□□□ -0.73
SMAD4-214ENST00000592186 SLC23A2Q9UGH3 650 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 LGALS13Q9UHV8 139 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 PNMA8BQ9ULN7 279 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-214ENST00000592186 ACOT9Q9Y305 439 aa10.47□□□□□ -0.73
SMAD4-214ENST00000592186 SLC5A10A0PJK1 596 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 CCDC189A1A4V9 331 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 HMX2A2RU54 273 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PRR19A6NJB7 356 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 TRIM49D1C9J1S8 452 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SCAMP1O15126 338 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 RGS16O15492 202 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 OPA1O60313 960 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PCDHGA12O60330 932 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PIAS2O75928 621 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SLC35G4P0C7Q5 338 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ALPPL2P10696 532 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ITGB6P18564 788 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PBLDP30039 288 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ACTR1BP42025 376 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ABCG1P45844 678 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 CCT8P50990 548 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ACTR1AP61163 376 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 TIAL1Q01085 375 aaKnown RBP eCLIP10.46□□□□□ -0.736e-7■□□□□ 9.5
SMAD4-214ENST00000592186 SLC14A1Q13336 389 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 BOP1Q14137 746 aaKnown RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ZKSCAN8Q15776 578 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ZNF658BQ4V348 819 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 TAF1BQ53T94 588 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PRAMEF14Q5SWL7 426 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PAQR3Q6TCH7 311 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ABRAXAS1Q6UWZ7 409 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SLC22A15Q8IZD6 547 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 GOLGA6L1Q8N7Z2 621 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 AVL9Q8NBF6 648 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SIDT2Q8NBJ9 832 aaKnown RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 ZNF548Q8NEK5 533 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 FAM46DQ8NEK8 389 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 CD200R1Q8TD46 325 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 LMX1AQ8TE12 382 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 GLMNQ92990 594 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 FOPNLQ96NB1 174 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 OLFM1Q99784 485 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 LRRC61Q9BV99 259 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 DUSP23Q9BVJ7 150 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 GTPBP2Q9BX10 602 aaKnown RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 OSGEPL1Q9H4B0 414 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 TM7SF3Q9NS93 570 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SEMA4GQ9NTN9 838 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 EURLQ9NYK6 297 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 NCKIPSDQ9NZQ3 722 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 SENP1Q9P0U3 644 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 GULP1Q9UBP9 304 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 TBK1Q9UHD2 729 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 KCNK6Q9Y257 313 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 DNAJC16Q9Y2G8 782 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 MED16Q9Y2X0 877 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PCDHGB2Q9Y5G2 931 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 PCYT1BQ9Y5K3 369 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-214ENST00000592186 HEBP2Q9Y5Z4 205 aa10.46□□□□□ -0.73
SMAD4-214ENST00000592186 CEP192Q8TEP8 1941 aa10.46□□□□□ -0.74
SMAD4-214ENST00000592186 A0A096LPK6 155 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 KIR2DS5A0A0G2JLQ3 304 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 A0A0G2JNG1 304 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 KIR2DS3K7RE56 304 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 IFRD1O00458 451 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-214ENST00000592186 MAP2K7O14733 419 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 YY2O15391 372 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
SMAD4-214ENST00000592186 RPN2P04844 631 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 C2P06681 752 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 F7P08709 466 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-214ENST00000592186 MPC1LP0DKB6 136 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 MAGEA12P43365 314 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 ATP6V0D1P61421 351 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 SPEM2Q0P670 501 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 GPS2Q13227 327 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 BMPR2Q13873 1038 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 NFE2L1Q14494 772 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 GBX1Q14549 363 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 KIR2DS5Q14953 304 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 FAM83EQ2M2I3 478 aa10.45□□□□□ -0.74
SMAD4-214ENST00000592186 INAVAQ3KP66 663 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms