RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ANKLE1Q8NAG6 615 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 GLB1L3Q8NCI6 653 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 PHF10Q8WUB8 498 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 HIPK3Q9H422 1215 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 WDR6Q9NNW5 1121 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 MYH9P35579 1960 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 PRORSD1PA6NEY8 169 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 SPATA31D3P0C874 917 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 RPS14P62263 151 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 SERINC3Q13530 473 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 ANXA8L1Q5VT79 327 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 SPATA31D4Q6ZUB0 917 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 PNPLA1Q8N8W4 532 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 PIK3C3Q8NEB9 887 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 OR5K1Q8NHB7 308 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 PLD4Q96BZ4 506 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 ERLEC1Q96DZ1 483 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 SMAD5Q99717 465 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 OSGEPL1Q9H4B0 414 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 CLN6Q9NWW5 311 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 KIAA1522Q9P206 1035 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 TOR1BO14657 336 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 ACADVLP49748 655 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 PPP1R8Q12972 351 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 LAPTM5Q13571 262 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 DOK6Q6PKX4 331 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 AHSA2Q719I0 299 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 KRT73Q86Y46 540 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 OR10T2Q8NGX3 314 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 FEM1AQ9BSK4 669 aa16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMARCA4-215ENST00000590574 HAPLN1P10915 354 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 VARSP26640 1264 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 OR4F6Q8NGB9 312 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 C1orf74Q96LT6 269 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 CXCL16Q9H2A7 254 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 CCM2LQ9NUG4 571 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 CD84Q9UIB8 345 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 SOCS2O14508 198 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ALPIP09923 528 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 COL6A1P12109 1028 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 UGT1A1P22309 533 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 UGT1A4P22310 534 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 UGT1A3P35503 534 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 UGT1A5P35504 534 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ERICH5Q6P6B1 374 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 GOLGA7Q7Z5G4 137 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 HPS1Q92902 700 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ZDHHC7Q9NXF8 308 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ANGPT4Q9Y264 503 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 H3BNH8 94 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 PRAMEF11O60813 436 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 SEMG2Q02383 582 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 PDZK1Q5T2W1 519 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 AGMOQ6ZNB7 445 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 P2RY8Q86VZ1 359 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 CFAP97Q9P2B7 532 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 COQ6Q9Y2Z9 468 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ZNF12P17014 697 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ARSDP51689 593 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 PM20D1Q6GTS8 502 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 CLP1Q92989 425 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ISOC1Q96CN7 298 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ZNF558Q96NG5 402 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 NLNQ9BYT8 704 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 PTBP2Q9UKA9 531 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 CAB39Q9Y376 341 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 ASB3Q9Y575 518 aa16.86■□□□□ 0.29
SMARCA4-215ENST00000590574 A0A0D9SEW6 157 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 SEPT4O43236 478 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 EFNA1P20827 205 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 PDCD4Q53EL6 469 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 ZNF789Q5FWF6 425 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 RBM48Q5RL73 367 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 PIK3R6Q5UE93 754 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 UGT2A3Q6UWM9 527 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 NUDT18Q6ZVK8 323 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 GKN1Q9NS71 199 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 Q9Y3F1 56 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 RSL1D1O76021 490 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 PRKD3O94806 890 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 MFN2O95140 757 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 SLC6A2P23975 617 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 FMO3P31513 532 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 AP1S1P61966 158 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 CYP2A13Q16696 494 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 SLC15A3Q8IY34 581 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 TTC29Q8NA56 475 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 C8orf48Q96LL4 319 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 YTHDF1Q9BYJ9 559 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 SOX17Q9H6I2 414 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 NLE1Q9NVX2 485 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 ZNF99A8MXY4 864 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 K7EPI3 171 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 PABPC1P11940 636 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 MED22Q15528 200 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 MARCH8Q5T0T0 291 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 MAMDC4Q6UXC1 1216 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 MAVSQ7Z434 540 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms