RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 FOXJ1Q92949 421 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 GLMNQ92990 594 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 ERVK-6Q9BXR3 956 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 NPHS2Q9NP85 383 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 PHPT1Q9NRX4 125 aaPredicted RBP25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 KLHL14Q9P2G3 628 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 OARD1Q9Y530 152 aa25.54■■□□□ 1.68
SCAMP4-210ENST00000588555 SERPINB5P36952 375 aa25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 PHKG1Q16816 387 aa25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 ARL13AQ5H913 290 aaPredicted RBP25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 RASGRP3Q8IV61 690 aa25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 UTP6Q9NYH9 597 aaKnown RBP25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 NUDT4Q9NZJ9 180 aa25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 FAM8A1Q9UBU6 413 aa25.53■■□□□ 1.68
SCAMP4-210ENST00000588555 ANKRD12Q6UB98 2062 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 HSPA4LO95757 839 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 GSTM1P09488 218 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 TROVE2P10155 538 aaKnown RBP eCLIP25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 RPS9P46781 194 aaKnown RBP25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 GSTM4Q03013 218 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 UNC50Q53HI1 259 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 FOXR1Q6PIV2 292 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 CRTC3Q6UUV7 619 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 FRMD7Q6ZUT3 714 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 CACNA2D3Q8IZS8 1091 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 GJD3Q8N144 294 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 SPEM1Q8N4L4 309 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 CCDC197Q8NCU1 140 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 RFWD2Q8NHY2 731 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 PPP4R1Q8TF05 950 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 ASB11Q8WXH4 323 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 TOE1Q96GM8 510 aaKnown RBP25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 CNDP1Q96KN2 507 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 ASB2Q96Q27 587 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 MYOCQ99972 504 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 TRIM55Q9BYV6 548 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 GSTO2Q9H4Y5 243 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 WSB2Q9NYS7 404 aaPredicted RBP25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 HAO1Q9UJM8 370 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 TMCO1Q9UM00 188 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 DNAJC16Q9Y2G8 782 aa25.52■■□□□ 1.68
SCAMP4-210ENST00000588555 C17orf113A0A1B0GUU1 675 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 NCF1BA6NI72 391 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 NCF1CA8MVU1 366 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 GPR89AB7ZAQ6 455 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 STX16-NPEPL1H3BU86 382 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 STX16O14662 325 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 SIX3O95343 332 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 GPR89BP0CG08 455 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 NCF1P14598 390 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 PBLDP30039 288 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 SYTL3Q4VX76 610 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 FRA10AC1Q70Z53 315 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 RPS27LQ71UM5 84 aaKnown RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 PIWIL2Q8TC59 973 aaKnown RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 TMEM159Q96B96 161 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 APOOQ9BUR5 198 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 C6orf106Q9H6K1 298 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 KCNK13Q9HB14 408 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 RDH14Q9HBH5 336 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 CD274Q9NZQ7 290 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 MARCOQ9UEW3 520 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 LRRC14BA6NHZ5 514 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 LIN7AO14910 233 aaPredicted RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 FFAR2O15552 330 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 POP7O75817 140 aaKnown RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 PREPP48147 710 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 ALDH18A1P54886 795 aaKnown RBP25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 CFAP157Q5JU67 520 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 SLC22A15Q8IZD6 547 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 ZNF781Q8N8C0 355 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 PDPRQ8NCN5 879 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 OR2L2Q8NH16 312 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 C10orf82Q8WW14 230 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 C1QTNF3Q9BXJ4 246 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 EBF2Q9HAK2 575 aa25.51■■□□□ 1.67
SCAMP4-210ENST00000588555 POM121BA6NF01 834 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 GFYI3L273 518 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 MATN4O95460 622 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 IGHV4-34P06331 123 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 HNRNPA2B1P22626 353 aaKnown RBP25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 OXTRP30559 389 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 SETDB1Q15047 1291 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 RAB44Q7Z6P3 723 aaPredicted RBP25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 SLC12A9Q9BXP2 914 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 TPSD1Q9BZJ3 242 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 COG4Q9H9E3 785 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 PNPOQ9NVS9 261 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 PRKAB1Q9Y478 270 aa25.5■■□□□ 1.67
SCAMP4-210ENST00000588555 ZNF217O75362 1048 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 FUCA1P04066 466 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 C8GP07360 202 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 RPS17P08708 135 aaKnown RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 HOXC4P09017 264 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 KITP10721 976 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 CCR5P51681 352 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 ARHGAP8P85298 464 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 MTAPQ13126 283 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 SP140Q13342 867 aa25.49■■□□□ 1.67
SCAMP4-210ENST00000588555 LRRTM4Q86VH4 590 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms