RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PDHA2P29803 388 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CBSP35520 551 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 NUDT1P36639 197 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 RGS4P49798 205 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 YPEL5P62699 121 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 ARHGAP8P85298 464 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 IL9RQ01113 521 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CSTF1Q05048 431 aaKnown RBP11.09□□□□□ -0.63
VMP1-207ENST00000588131 SRSF5Q13243 272 aaKnown RBP11.09□□□□□ -0.63
VMP1-207ENST00000588131 NFE2L1Q14494 772 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 SYTL3Q4VX76 610 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CES4AQ5XG92 561 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 ENPP7Q6UWV6 458 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 C10orf107Q8IVU9 208 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 C1orf210Q8IVY1 113 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CFAP206Q8IYR0 622 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 TMEFF1Q8IYR6 380 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 MYO1HQ8N1T3 1032 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 OXR1Q8N573 874 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 DTWD2Q8NBA8 298 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 OR56A4Q8NGH8 313 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 OR2L2Q8NH16 312 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 RHEBL1Q8TAI7 183 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 GLMNQ92990 594 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 EXT2Q93063 718 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 KIAA1191Q96A73 305 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 PDXPQ96GD0 296 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 SCARF2Q96GP6 870 aaPredicted RBP11.09□□□□□ -0.63
VMP1-207ENST00000588131 HSPA12BQ96MM6 686 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 WDR92Q96MX6 357 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 ATOH8Q96SQ7 321 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CAAP1Q9H8G2 361 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 GPR27Q9NS67 375 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 ZNHIT2Q9UHR6 403 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 PLEKHM1Q9Y4G2 1056 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 CEP192Q8TEP8 1941 aa11.09□□□□□ -0.63
VMP1-207ENST00000588131 C17orf113A0A1B0GUU1 675 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 PRSS38A1L453 326 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 MGAT4DA6NG13 374 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 UBXN8O00124 270 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 EIF3FO00303 357 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 LIN7AO14910 233 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 KMOO15229 486 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 BIRC5O15392 142 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 DLX3O60479 287 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 GPR37L1O60883 481 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 KERAO60938 352 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 SLCO2B1O94956 709 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 WNT1P04628 370 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 GSTM1P09488 218 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 THEGLP0DJG4 465 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 MYL2P10916 166 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 FGF3P11487 239 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 ACP5P13686 325 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 ENO3P13929 434 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 KELP23276 732 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 LSP1P33241 339 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 GNPDA1P46926 289 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 RABIFP47224 123 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 HK3P52790 923 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 THOP1P52888 689 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 GSTM4Q03013 218 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 PDK4Q16654 411 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 ALG11Q2TAA5 492 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 PYCR3Q53H96 274 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 SBSNQ6UWP8 590 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 LAYNQ6UX15 382 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 ARMCX6Q7L4S7 300 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 CHST15Q7LFX5 561 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 AMZ2Q86W34 360 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 LONP2Q86WA8 852 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 GALNT13Q8IUC8 556 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 NUDCD3Q8IVD9 361 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 SLC22A15Q8IZD6 547 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 FBXL6Q8N531 539 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 RDH11Q8TC12 318 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 HM13Q8TCT9 377 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 ASZ1Q8WWH4 475 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 DLG3Q92796 817 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 TSACCQ96A04 125 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 TMEM159Q96B96 161 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 MAGEB18Q96M61 343 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 CCDC134Q9H6E4 229 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 RMI1Q9H9A7 625 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 CARS2Q9HA77 564 aaKnown RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 CYP4F12Q9HCS2 524 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 AASDHPPTQ9NRN7 309 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 SIRPGQ9P1W8 387 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 MID2Q9UJV3 735 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 RNF112Q9ULX5 631 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 DNAJC16Q9Y2G8 782 aa11.08□□□□□ -0.64
VMP1-207ENST00000588131 DNMT3AQ9Y6K1 912 aaPredicted RBP11.08□□□□□ -0.64
VMP1-207ENST00000588131 A0A1W2PR77 199 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 A8MT66 165 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 SUPT3HB4E1H0 165 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 TOR1BO14657 336 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 SHOX2O60902 331 aaPredicted RBP11.07□□□□□ -0.64
VMP1-207ENST00000588131 SUPT3HO75486 399 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms