RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 BTNL10A8MVZ5 291 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 SPAG6O75602 509 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 STK10O94804 968 aaKnown RBP18.34■□□□□ 0.53
TRIM47-205ENST00000587774 SLC35G4P0C7Q5 338 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM47-205ENST00000587774 BCL7AQ4VC05 210 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 TMTC1Q8IUR5 882 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 LRRC57Q8N9N7 239 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 SIDT2Q8NBJ9 832 aaKnown RBP18.34■□□□□ 0.53
TRIM47-205ENST00000587774 MRFAP1L1Q96HT8 127 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 RMDN2Q96LZ7 410 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 MAP3K3Q99759 626 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 CRLS1Q9UJA2 301 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 TLCD2A6NGC4 264 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 CCL22O00626 93 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 TJP3O95049 919 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 CRTAMO95727 393 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 EBLN1P0CF75 366 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 PYGMP11217 842 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 FOLR1P15328 257 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 TMPRSS15P98073 1019 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 PDE1BQ01064 536 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 SPARCL1Q14515 664 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 DNTTIP2Q5QJE6 756 aaKnown RBP18.33■□□□□ 0.52
TRIM47-205ENST00000587774 DENND5AQ6IQ26 1287 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 CYB5D1Q6P9G0 228 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 CERS6Q6ZMG9 384 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 MICALCLQ6ZW33 695 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 NXPE1Q8N323 547 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 LILRA3Q8N6C8 439 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-205ENST00000587774 C9orf43Q8TAL5 461 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-205ENST00000587774 APOBEC4Q8WW27 367 aaKnown RBP18.33■□□□□ 0.52
TRIM47-205ENST00000587774 LINC00615Q96LM1 132 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-205ENST00000587774 CD180Q99467 661 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 TBL1YQ9BQ87 522 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 PDE7BQ9NP56 450 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 SLC24A2Q9UI40 661 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 ACSL5Q9ULC5 683 aa18.33■□□□□ 0.52
TRIM47-205ENST00000587774 PCM1Q15154 2024 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 MAST4O15021 2626 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 KLHL33A6NCF5 533 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 FURINP09958 794 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 PRLHRP49683 370 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 VAV2P52735 878 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 TLE1Q04724 770 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 PWWP2BQ6NUJ5 590 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 OOSP2Q86WS3 158 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 KLHDC8BQ8IXV7 354 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 ULK4Q96C45 1275 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 PPP1R2P1Q96PQ5 205 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 FAM96AQ9H5X1 160 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 KIR3DX1Q9H7L2 352 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 ZNF71Q9NQZ8 489 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-205ENST00000587774 HRASLS2Q9NWW9 162 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 RARRES3Q9UL19 164 aa18.32■□□□□ 0.52
TRIM47-205ENST00000587774 LRRK2Q5S007 2527 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 LDB2O43679 373 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 KATNA1O75449 491 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 RALBP11234 206 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 ITGALP20701 1170 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 HADHAP40939 763 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 CETN2P41208 172 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 ARCN1P48444 511 aaKnown RBP18.31■□□□□ 0.52
TRIM47-205ENST00000587774 ERV3-1Q14264 604 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 SKIDA1Q1XH10 827 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 SNX20Q7Z614 316 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 KMT5CQ86Y97 462 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 HM13Q8TCT9 377 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 CT55Q8WUE5 264 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 DCUN1D1Q96GG9 259 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 ABHD17AQ96GS6 310 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 RBSNQ9H1K0 784 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 EPN3Q9H201 632 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 ARNT2Q9HBZ2 717 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 LHX9Q9NQ69 397 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 FGF21Q9NSA1 209 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 PACSIN2Q9UNF0 486 aaPredicted RBP18.31■□□□□ 0.52
TRIM47-205ENST00000587774 PCDHB3Q9Y5E6 796 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 KCNMB2Q9Y691 235 aa18.31■□□□□ 0.52
TRIM47-205ENST00000587774 UTP20O75691 2785 aaKnown RBP18.3■□□□□ 0.52
TRIM47-205ENST00000587774 UBA6A0AVT1 1052 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-205ENST00000587774 OR6C74A6NCV1 312 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 MT-ND3P03897 115 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 POLBP06746 335 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 CCNYL3P0C7X3 344 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 MC4RP32245 332 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 HSD11B2P80365 405 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 ACY1Q03154 408 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 DNASE1L3Q13609 305 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 KCTD11Q693B1 232 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 CAPRIN2Q6IMN6 1127 aaKnown RBP18.3■□□□□ 0.52
TRIM47-205ENST00000587774 KIAA1328Q86T90 577 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 CFAP206Q8IYR0 622 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 ZFPM2Q8WW38 1151 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 DNAJC1Q96KC8 554 aaKnown RBP18.3■□□□□ 0.52
TRIM47-205ENST00000587774 PPM1MQ96MI6 270 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 COPS8Q99627 209 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 C19orf43Q9BQ61 176 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 FEZ2Q9UHY8 353 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-205ENST00000587774 KCND3Q9UK17 655 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms