RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 VPS4AQ9UN37 437 aa19.62■□□□□ 0.73
CLPTM1-204ENST00000585961 SPENQ96T58 3664 aaKnown RBP19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 MGAT4DA6NG13 374 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 TLCD2A6NGC4 264 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 A6NL46 340 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 PGDP52209 483 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 KPNA2P52292 529 aaKnown RBP19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 GPS2Q13227 327 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 ITGA9Q13797 1035 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 LONRF2Q1L5Z9 754 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 LURAP1LQ8IV03 231 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 EFCAB3Q8N7B9 438 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 CPT1CQ8TCG5 803 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 THAP4Q8WY91 577 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 APOL2Q9BQE5 337 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 HEMGNQ9BXL5 484 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 SOHLH2Q9NX45 425 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 HACD3Q9P035 362 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 ALG6Q9Y672 507 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 LRRK2Q5S007 2527 aa19.61■□□□□ 0.73
CLPTM1-204ENST00000585961 SLC9B1P1A6NJY1 282 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 ZBTB11O95625 1053 aaPredicted RBP19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TPM3P06753 285 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 ATXN8OSP0DMR3 200 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TUBB4BP68371 445 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TMPRSS15P98073 1019 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 OLIG2Q13516 323 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TUBB2AQ13885 445 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TAZQ16635 292 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 SYVN1Q86TM6 617 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 OOSP2Q86WS3 158 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 KMT5CQ86Y97 462 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 OR4K2Q8NGD2 314 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 OR2L2Q8NH16 312 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 DTX3LQ8TDB6 740 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 ZNF501Q96CX3 271 aaPredicted RBP19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TUBB2BQ9BVA1 445 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 FICDQ9BVA6 458 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TLR10Q9BXR5 811 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 MFRPQ9BY79 579 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 ASB8Q9H765 288 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 ABHD10Q9NUJ1 306 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 LUZP4Q9P127 313 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 RSPH14Q9UHP6 348 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 SLC24A2Q9UI40 661 aa19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 TNRC6AQ8NDV7 1962 aaKnown RBP19.6■□□□□ 0.73
CLPTM1-204ENST00000585961 H7C0C1 242 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 ZNF185O15231 689 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 CPNE3O75131 537 aaKnown RBP19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 KLK3P07288 261 aaPredicted RBP19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 HLA-DPA1P20036 260 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 ATP5OP48047 213 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 MPP3Q13368 585 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 PLEKHS1Q5SXH7 462 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 TMTC4Q5T4D3 741 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 MICALCLQ6ZW33 695 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 PHC3Q8NDX5 983 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 CLIP3Q96DZ5 547 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 FERD3LQ96RJ6 166 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 CD180Q99467 661 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 FSD1LQ9BXM9 530 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 KLHL25Q9H0H3 589 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 FKBPLQ9UIM3 349 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 ACSL5Q9ULC5 683 aa19.59■□□□□ 0.73
CLPTM1-204ENST00000585961 ZNF106Q9H2Y7 1883 aaKnown RBP19.58■□□□□ 0.73
CLPTM1-204ENST00000585961 MEN1O00255 615 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 AGFG2O95081 481 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 ZRANB2O95218 330 aaKnown RBP eCLIP19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 PRAMEF1O95521 474 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 LPOP22079 712 aaPredicted RBP19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 RBL1P28749 1068 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 PTGIRP43119 386 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 LAMB3Q13751 1172 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 FHL5Q5TD97 284 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 CAPRIN2Q6IMN6 1127 aaKnown RBP19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 CCDC50Q8IVM0 306 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 KIR3DX1Q9H7L2 352 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 MAP10Q9P2G4 905 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 TFR2Q9UP52 801 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 COLEC10Q9Y6Z7 277 aa19.58■□□□□ 0.72
CLPTM1-204ENST00000585961 CCDC66A2RUB6 948 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 C2orf81A6NN90 581 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 SGTAO43765 313 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 SRP72O76094 671 aaKnown RBP19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 TPM1P09493 284 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 SLC35G4P0C7Q5 338 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 CDH3P22223 829 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 MARCKSL1P49006 195 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 ABRQ12979 859 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 TFDP3Q5H9I0 405 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 RCOR2Q8IZ40 523 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 ENDOVQ8N8Q3 282 aaKnown RBP19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 DCUN1D1Q96GG9 259 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 RMDN2Q96LZ7 410 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 TRHDEQ9UKU6 1024 aa19.57■□□□□ 0.72
CLPTM1-204ENST00000585961 USP9YO00507 2555 aaPredicted RBP19.56■□□□□ 0.72
CLPTM1-204ENST00000585961 hCG_1818297A0A087WSY0 165 aa19.56■□□□□ 0.72
CLPTM1-204ENST00000585961 GSAPA4D1B5 854 aa19.56■□□□□ 0.72
CLPTM1-204ENST00000585961 CCL22O00626 93 aa19.56■□□□□ 0.72
CLPTM1-204ENST00000585961 CBFA2T2O43439 604 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms