RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 HEATR4Q86WZ0 1026 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 SLC22A9Q8IVM8 553 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 PIANPQ8IYJ0 282 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 TCEAL3Q969E4 200 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 PDLIM5Q96HC4 596 aaKnown RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 SLC13A1Q9BZW2 595 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 FAM96AQ9H5X1 160 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 LATS2Q9NRM7 1088 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 AASDHPPTQ9NRN7 309 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 SLC17A6Q9P2U8 582 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 FNDC3AQ9Y2H6 1198 aaKnown RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 OR1A2Q9Y585 309 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 PCYT1BQ9Y5K3 369 aaPredicted RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 UBA6A0AVT1 1052 aaPredicted RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 TMEM202A6NGA9 273 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 GOLGA8RI6L899 631 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 TOR1BO14657 336 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 GDF9O60383 454 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 PROCP04070 461 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 HOXC4P09017 264 aaPredicted RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 THEGLP0DJG4 465 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 CTSKP43235 329 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 NXPH1P58417 271 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 KIAA1024LP59773 190 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 CDK3Q00526 305 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 EIF2B5Q13144 721 aaKnown RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 SEMA3AQ14563 771 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 DUOXA1Q1HG43 343 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 KIF19Q2TAC6 998 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 N4BP2L1Q5TBK1 243 aaPredicted RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 PTRHD1Q6GMV3 140 aaKnown RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 PSAPL1Q6NUJ1 521 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 TRIM74Q86UV6 250 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 KLHDC7BQ96G42 594 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 ATXN7L3BQ96GX2 97 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 FAM111AQ96PZ2 611 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 SPATA16Q9BXB7 569 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 DERL2Q9GZP9 239 aa12.44□□□□□ -0.42
VMP1-202ENST00000585847 TFB2MQ9H5Q4 396 aaKnown RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 MAP1BP46821 2468 aaKnown RBP12.44□□□□□ -0.42
VMP1-202ENST00000585847 PIKFYVEQ9Y2I7 2098 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 TLR4O00206 839 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 INPP4BO15327 924 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 VEGFDO43915 354 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 BPGMP07738 259 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 CREB1P16220 341 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 RABIFP47224 123 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 AFF3P51826 1226 aaKnown RBP12.43□□□□□ -0.42
VMP1-202ENST00000585847 WDR4P57081 412 aaKnown RBP12.43□□□□□ -0.42
VMP1-202ENST00000585847 IL2P60568 153 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 YPEL5P62699 121 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 IRX4P78413 519 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 NFKB2Q00653 900 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 MPP2Q14168 576 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 FZD2Q14332 565 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 NFATC4Q14934 902 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 SHBQ15464 509 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 TRIM61Q5EBN2 209 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 CDKL4Q5MAI5 379 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 METTL2BQ6P1Q9 378 aaKnown RBP12.43□□□□□ -0.42
VMP1-202ENST00000585847 PIWIL4Q7Z3Z4 852 aaKnown RBP12.43□□□□□ -0.42
VMP1-202ENST00000585847 CMC1Q7Z7K0 106 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 ADAMTSL2Q86TH1 951 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 CCDC63Q8NA47 563 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 MDM1Q8TC05 714 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 BTN2A2Q8WVV5 523 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 INPP5DQ92835 1189 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 GLYATL1Q969I3 302 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 TRMOQ9BU70 441 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 SPATS2LQ9NUQ6 558 aaKnown RBP12.43□□□□□ -0.42
VMP1-202ENST00000585847 COPG2Q9UBF2 871 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 SUSD2Q9UGT4 822 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 ANGPTL2Q9UKU9 493 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 CRYL1Q9Y2S2 319 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 SNX11Q9Y5W9 270 aa12.43□□□□□ -0.42
VMP1-202ENST00000585847 ZFC3H1O60293 1989 aaKnown RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 SPTY2D1-AS1A0A0U1RR47 76 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 TMEM114B3SHH9 223 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 MTX2O75431 263 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 TGDSO95455 350 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 SERPINE1P05121 402 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 CEACAM5P06731 702 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 ZNF806P0C7X5 589 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 MYL2P10916 166 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 NEFHP12036 1026 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 MYCLP1P12525 358 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 CPA3P15088 417 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 GNSP15586 552 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 DGKAP23743 735 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 ATP5F1P24539 256 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 DPP6P42658 865 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 DNAJB13P59910 316 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 B4GALNT1Q00973 533 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 OVGP1Q12889 678 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 GRIK2Q13002 908 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 SP140Q13342 867 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms