RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 SLC40A1Q9NP59 571 aa20.32■□□□□ 0.84
TOP3A-218ENST00000584669 CHRAC1Q9NRG0 131 aa20.32■□□□□ 0.84
TOP3A-218ENST00000584669 FOXJ2Q9P0K8 574 aa20.32■□□□□ 0.84
TOP3A-218ENST00000584669 RIMKLBQ9ULI2 386 aa20.32■□□□□ 0.84
TOP3A-218ENST00000584669 NEU2Q9Y3R4 380 aa20.32■□□□□ 0.84
TOP3A-218ENST00000584669 SMG1Q96Q15 3661 aaKnown RBP20.31■□□□□ 0.84
TOP3A-218ENST00000584669 LILRA5A6NI73 299 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 LIPCP11150 499 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 MGAT1P26572 445 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 ACVR1Q04771 509 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 RPE65Q16518 533 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 PCID2Q5JVF3 399 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 ANKRD22Q5VYY1 191 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 TMEM71Q6P5X7 295 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 VASH2Q86V25 355 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 UCK1Q9HA47 277 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 POT1Q9NUX5 634 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 SYBUQ9NX95 663 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 OGFRQ9NZT2 677 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 CFAP20Q9Y6A4 193 aaKnown RBP20.31■□□□□ 0.84
TOP3A-218ENST00000584669 PRSS21Q9Y6M0 314 aa20.31■□□□□ 0.84
TOP3A-218ENST00000584669 SDK2Q58EX2 2172 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 POLBP06746 335 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 THRAP10827 490 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 CCL4P13236 92 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 PLA2G2AP14555 144 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 TCP1P17987 556 aaKnown RBP20.3■□□□□ 0.84
TOP3A-218ENST00000584669 CDK16Q00536 496 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 GPR18Q14330 331 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 SNAP47Q5SQN1 464 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 MANEAQ5SRI9 462 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 LRRC8BQ6P9F7 803 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 AFTPHQ6ULP2 937 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 NLRP9Q7RTR0 991 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 CFAP206Q8IYR0 622 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 SPDYE1Q8NFV5 336 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-218ENST00000584669 OR6P1Q8NGX9 317 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 DPYSL5Q9BPU6 564 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 ACSL6Q9UKU0 697 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 PCDHB11Q9Y5F2 797 aa20.3■□□□□ 0.84
TOP3A-218ENST00000584669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.3■□□□□ 0.84
TOP3A-218ENST00000584669 GOLGA6L10A0A0M3HER8 536 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 A8MU76 341 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 C9orf172C9J069 976 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 TMEM63AO94886 807 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 TYRP1P17643 537 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 NMBRP28336 390 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 MAGEA6P43360 314 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 NPY2RP49146 381 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 PRAMEP78395 509 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 SEMA3AQ14563 771 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 TMEM164Q5U3C3 297 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 DUS1LQ6P1R4 473 aaKnown RBP20.29■□□□□ 0.84
TOP3A-218ENST00000584669 WDR74Q6RFH5 385 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-218ENST00000584669 OR4L1Q8NH43 312 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 HM13Q8TCT9 377 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 JPH3Q8WXH2 748 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-218ENST00000584669 CPT1BQ92523 772 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 CAPZA3Q96KX2 299 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 RMDN2Q96LZ7 410 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 INSM2Q96T92 566 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-218ENST00000584669 CCM2Q9BSQ5 444 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 IL22Q9GZX6 179 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 IMP3Q9NV31 184 aaKnown RBP20.29■□□□□ 0.84
TOP3A-218ENST00000584669 BFARQ9NZS9 450 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 ACSL5Q9ULC5 683 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 CFAP46Q8IYW2 2715 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 PIEZO2Q9H5I5 2752 aa20.29■□□□□ 0.84
TOP3A-218ENST00000584669 KLHL33A6NCF5 533 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 EFSO43281 561 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 OR1I1O60431 355 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 AVILO75366 819 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 UBXN7O94888 489 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 MTHFD1P11586 935 aaKnown RBP20.28■□□□□ 0.84
TOP3A-218ENST00000584669 FNTAP49354 379 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 TRA2AQ13595 282 aaKnown RBP eCLIP20.28■□□□□ 0.84
TOP3A-218ENST00000584669 ITIH4Q14624 930 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 ZNF658BQ4V348 819 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-218ENST00000584669 PAPD7Q5XG87 772 aaKnown RBP20.28■□□□□ 0.84
TOP3A-218ENST00000584669 PEX13Q92968 403 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.28■□□□□ 0.842e-7■■■■□ 22.9
TOP3A-218ENST00000584669 C12orf66Q96MD2 445 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 NAPGQ99747 312 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-218ENST00000584669 DDX47Q9H0S4 455 aaKnown RBP20.28■□□□□ 0.84
TOP3A-218ENST00000584669 EPB41L1Q9H4G0 881 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 COG4Q9H9E3 785 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 TREX1Q9NSU2 369 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 PDP2Q9P2J9 529 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 KLHL3Q9UH77 587 aa20.28■□□□□ 0.84
TOP3A-218ENST00000584669 C17orf113A0A1B0GUU1 675 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 AP3B1O00203 1094 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 HGSO14964 777 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-218ENST00000584669 FANCGO15287 622 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 SLC35G4P0C7Q5 338 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 AMD1P17707 334 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 NSG1P42857 185 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 GFERP55789 205 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 CES3Q6UWW8 571 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 PACS1Q6VY07 963 aa20.27■□□□□ 0.84
TOP3A-218ENST00000584669 LDB1Q86U70 411 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms