RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 LEFTY2O00292 366 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 FBP2O00757 339 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 EI24O14681 340 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ZNF197O14709 1029 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 DIRAS1O95057 198 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 MYCLP1P12525 358 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 PRDX6P30041 224 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ERVPABLB-1P60509 514 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 FAM189BP81408 668 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 NFATC2Q13469 925 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ABRAXAS2Q15018 415 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 LIN52Q52LA3 116 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 PAGE3Q5JUK9 113 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 C6orf136Q5SQH8 315 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 SERPINA13PQ6UXR4 307 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 BEND5Q7L4P6 421 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 RD3Q7Z3Z2 195 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 CNTN4Q8IWV2 1026 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 TEX37Q96LM6 180 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ZNF599Q96NL3 588 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 TCF12Q99081 682 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 TSEN34Q9BSV6 310 aaKnown RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 SUV39H2Q9H5I1 410 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 PCDHGB4Q9UN71 923 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 DGKBQ9Y6T7 804 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 MROH6A6NGR9 719 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 NPIPB15A6NHN6 443 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 MAP3K13O43283 966 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 MYO1DO94832 1006 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 STATHP02808 62 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 HMGA1P17096 107 aaKnown RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 BPIP17213 487 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 HOXC13P31276 330 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 IST1P53990 364 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 CYP4F2P78329 520 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 RFTN2Q52LD8 501 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-217ENST00000584582 SPANXN4Q5MJ08 99 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 RAET1GQ6H3X3 334 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 FAM180BQ6P0A1 224 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 CYP20A1Q6UW02 462 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 GALNT5Q7Z7M9 940 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 KBTBD6Q86V97 674 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 TSPAN14Q8NG11 270 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 LKAAEAR1Q8TD35 194 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 ITM2BQ9Y287 266 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 PCDHGA7Q9Y5G6 932 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 SNX8Q9Y5X2 465 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 SQORQ9Y6N5 450 aa11.12□□□□□ -0.63
TOP3A-217ENST00000584582 MGAT4DA6NG13 374 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 NOBOXO60393 691 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 TYRP14679 529 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 DNAJB13P59910 316 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 AP1S1P61966 158 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ACSM2AQ08AH3 577 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ACSM2BQ68CK6 577 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 TTC23LQ6PF05 361 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 SLC39A5Q6ZMH5 540 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 SLC15A3Q8IY34 581 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 LILRA2Q8N149 483 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 CD200R1Q8TD46 325 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ASB9Q96DX5 294 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 SLC29A1Q99808 456 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 DERL2Q9GZP9 239 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 FAM83DQ9H4H8 585 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 LRTM1Q9HBL6 345 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 NEU3Q9UQ49 428 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 OTOFQ9HC10 1997 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 NME4O00746 187 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ARPC2O15144 300 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 BCAS2O75934 225 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-217ENST00000584582 PGLSO95336 258 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 PRLP01236 227 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 CLTBP09497 229 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ELFN1P0C7U0 828 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ETV3P41162 512 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 MAGEA12P43365 314 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 GRAMD4Q6IC98 578 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 SLC8B1Q6J4K2 584 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 DHRSXQ8N5I4 330 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 RIOK2Q9BVS4 552 aaKnown RBP11.11□□□□□ -0.63
TOP3A-217ENST00000584582 EMILIN2Q9BXX0 1053 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 DGCR6LQ9BY27 220 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 TMEM189-UBE2V1I3L0A0 370 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 COX7A2P14406 83 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 PRKACGP22612 351 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 GNPDA1P46926 289 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 HK2P52789 917 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 SATB1Q01826 763 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 CHIT1Q13231 466 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 PTCHD3Q3KNS1 767 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 GTDC1Q4AE62 458 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 DGKKQ5KSL6 1271 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 CXorf57Q6NSI4 855 aaKnown RBP11.11□□□□□ -0.63
TOP3A-217ENST00000584582 ZCCHC8Q6NZY4 707 aaKnown RBP11.11□□□□□ -0.63
TOP3A-217ENST00000584582 TXNDC11Q6PKC3 985 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 CCDC149Q6ZUS6 474 aa11.11□□□□□ -0.63
TOP3A-217ENST00000584582 LPCAT2Q7L5N7 544 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms