RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FBXO48Q5FWF7 155 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ERN2Q76MJ5 926 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PIWIL4Q7Z3Z4 852 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NET1Q7Z628 596 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TRIM74Q86UV6 250 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MYLK4Q86YV6 388 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KLK6Q92876 244 aa12.5□□□□□ -0.41
CDK5RAP3-217ENST00000580287 STX16-NPEPL1H3BU86 382 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 STK25O00506 426 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AREL1O15033 823 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RNASEH2AO75792 299 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SUPT7LO94864 414 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NTSR1P30989 418 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TAS2R38P59533 333 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CCNIQ14094 377 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SLC44A4Q53GD3 710 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM45BPQ6NSW5 357 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 Q6ZS52 159 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GALNT7Q86SF2 657 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RALGPS2Q86X27 583 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 HDDC3Q8N4P3 179 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PPFIBP2Q8ND30 876 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RPLP0P6Q8NHW5 317 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM45AQ8TCE6 357 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TCF12Q99081 682 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ZNF184Q99676 751 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 C1orf21Q9H246 121 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM8A1Q9UBU6 413 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 VTI1BQ9UEU0 232 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ADAMTS6Q9UKP5 1117 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CA14Q9ULX7 337 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 A0A1W2PQ67 120 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PRMT5O14744 637 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 HOXB2P14652 356 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PTGER3P43115 390 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GRSF1Q12849 480 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CAMK2GQ13555 558 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ACAP2Q15057 778 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TRMT5Q32P41 509 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PIP5KL1Q5T9C9 394 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TECPR1Q7Z6L1 1165 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SNX32Q86XE0 403 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CBARPQ8N350 705 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 BEND7Q8N7W2 519 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GANCQ8TET4 914 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PTERQ96BW5 349 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 UBXN10Q96LJ8 280 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 P2RY12Q9H244 342 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 C2orf42Q9NWW7 574 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NDE1Q9NXR1 346 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PKD2L2Q9NZM6 624 aa12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 MUC22E2RYF6 1773 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-217ENST00000580287 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TRBV5-4A0A0C4DH59 114 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 SLCO1B7G3V0H7 640 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CFLARO15519 480 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 C6P13671 934 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ZNF37AP17032 561 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NUDT2P50583 147 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PKNOX1P55347 436 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TBL3Q12788 808 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GPRC6AQ5T6X5 926 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PTRHD1Q6GMV3 140 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CPNE9Q8IYJ1 553 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 FAM3CQ92520 227 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AP2M1Q96CW1 435 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 OSBPL6Q9BZF3 934 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CLPBQ9H078 707 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 RSPH9Q9H1X1 276 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ANKRD12Q6UB98 2062 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 hCG_2014768A0A024R1R8 64 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 E5RI56 91 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 C1QTNF3-AMACRE9PGA6 284 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 NPHS1O60500 1241 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PCDH8O95206 1070 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 WISP3O95389 354 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 ZNF30P17039 623 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TCN1P20061 433 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PIK3R1P27986 724 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PEX2P28328 305 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CDC16Q13042 620 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CCDC126Q96EE4 140 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 PPP1R16AQ96I34 528 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TNFRSF12AQ9NP84 129 aa12.48□□□□□ -0.41
CDK5RAP3-217ENST00000580287 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms