RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 CCDC153Q494R4 210 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ACSBG2Q5FVE4 666 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PEAR1Q5VY43 1037 aaPredicted RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 RABEPKQ7Z6M1 372 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 MYO1HQ8N1T3 1032 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 KCTD4Q8WVF5 259 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ANKRD49Q8WVL7 239 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 LINGO1Q96FE5 620 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PDXPQ96GD0 296 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 SELENOSQ9BQE4 189 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 DPEP2Q9H4A9 486 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 CNOT10Q9H9A5 744 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 COG4Q9H9E3 785 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 MRPL40Q9NQ50 206 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 IGSF5Q9NSI5 407 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 RUVBL2Q9Y230 463 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 PLLPQ9Y342 182 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 SLCO1B1Q9Y6L6 691 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 TNRC6BQ9UPQ9 1833 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 VCANP13611 3396 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 TMEM120BA0PK00 339 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 TSPAN12O95859 305 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 FUCA1P04066 466 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 RBP1P09455 135 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 CD1DP15813 335 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 OAS2P29728 719 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 PBLDP30039 288 aaPredicted RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 CLCNKAP51800 687 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 NXPH1P58417 271 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 EIF2B5Q13144 721 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 SEPT7Q16181 437 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 PLA2G4EQ3MJ16 856 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ZC3H14Q6PJT7 736 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 CHST15Q7LFX5 561 aaPredicted RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 CFAP206Q8IYR0 622 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 SLC22A15Q8IZD6 547 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PLD6Q8N2A8 252 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 TCP10LQ8TDR4 215 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 EEF1AKMT1Q8WVE0 214 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 NXNL1Q96CM4 212 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 GPR78Q96P69 363 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PRRX2Q99811 253 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 TFB2MQ9H5Q4 396 aaKnown RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 NKIRAS1Q9NYS0 192 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 GULP1Q9UBP9 304 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 MID2Q9UJV3 735 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PILRBQ9UKJ0 227 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 ACSL5Q9ULC5 683 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 CDYLQ9Y232 598 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PRKAB1Q9Y478 270 aa10.54□□□□□ -0.72
SS18-213ENST00000579640 PCYT1BQ9Y5K3 369 aaPredicted RBP10.54□□□□□ -0.72
SS18-213ENST00000579640 LRP4O75096 1905 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 SPAG17Q6Q759 2223 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 ACP5P13686 325 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 HK3P52790 923 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 DLG1Q12959 904 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 NFE2L1Q14494 772 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 N4BP2L1Q5TBK1 243 aaPredicted RBP10.53□□□□□ -0.72
SS18-213ENST00000579640 METRNLQ641Q3 311 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 LVRNQ6Q4G3 990 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 CDHR3Q6ZTQ4 885 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 ADAMTSL2Q86TH1 951 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 SYT12Q8IV01 421 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 HID1Q8IV36 788 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 RHEBL1Q8TAI7 183 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 FAM76AQ8TAV0 307 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 STAG3L4Q8TBR4 150 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 TSACCQ96A04 125 aaPredicted RBP10.53□□□□□ -0.72
SS18-213ENST00000579640 KIAA1191Q96A73 305 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 LOXL4Q96JB6 756 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 MRPL57Q9BQC6 102 aaKnown RBP10.53□□□□□ -0.72
SS18-213ENST00000579640 MRPL46Q9H2W6 279 aaKnown RBP10.53□□□□□ -0.72
SS18-213ENST00000579640 KLC4Q9NSK0 619 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 TMEM216Q9P0N5 145 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 SLC23A2Q9UGH3 650 aa10.53□□□□□ -0.72
SS18-213ENST00000579640 PRR19A6NJB7 356 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 H3BM21 787 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 SLC16A5O15375 505 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 PLIN3O60664 434 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 CSF2P04141 144 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 C8GP07360 202 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 NME1P15531 152 aaKnown RBP10.52□□□□□ -0.73
SS18-213ENST00000579640 TFEBP19484 476 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 IDSP22304 550 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 RPA3P35244 121 aaPredicted RBP10.52□□□□□ -0.73
SS18-213ENST00000579640 ILF3Q12906 894 aaKnown RBP eCLIP10.52□□□□□ -0.73
SS18-213ENST00000579640 SP140Q13342 867 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 NAPRTQ6XQN6 538 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 CYHR1Q6ZMK1 362 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 RD3Q7Z3Z2 195 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 PIWIL4Q7Z3Z4 852 aaKnown RBP10.52□□□□□ -0.73
SS18-213ENST00000579640 ISCA2Q86U28 154 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
SS18-213ENST00000579640 PHACTR4Q8IZ21 702 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 CEP76Q8TAP6 659 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 RDH11Q8TC12 318 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 DENND1AQ8TEH3 1009 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 SCYL1Q96KG9 808 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 FOPNLQ96NB1 174 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms