RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ASCL3Q9NQ33 180 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 DYRK4Q9NR20 520 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
SS18-210ENST00000578700 SLC17A7Q9P2U7 560 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 PPM1HQ9ULR3 514 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 ACOT9Q9Y305 439 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 ARL5AQ9Y689 179 aa10.05□□□□□ -0.8
SS18-210ENST00000578700 HMX2A2RU54 273 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 CCDC162PA2VCL2 907 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 WDR91A4D1P6 747 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 K7ENP7 123 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 SCAMP1O15126 338 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 FZD6O60353 706 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 GOT2P00505 430 aaKnown RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 PDHA1P08559 390 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 GIMD1P0DJR0 217 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.8
SS18-210ENST00000578700 DRD4P21917 467 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 HNRNPA2B1P22626 353 aaKnown RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 XPAP23025 273 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 SERPINB4P48594 390 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 TTPAP49638 278 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZNF140P52738 457 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 TAS2R38P59533 333 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 RAB10P61026 200 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 MPP1Q00013 466 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 DMTNQ08495 405 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ASPHQ12797 758 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 MSLNQ13421 630 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 IHHQ14623 411 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 TSNAXIP1Q2TAA8 658 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZNF284Q2VY69 593 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 C6orf132Q5T0Z8 1188 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 FAM45BPQ6NSW5 357 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 INO80CQ6PI98 192 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 SH2D5Q6ZV89 423 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 EFL1Q7Z2Z2 1120 aaKnown RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 HORMAD1Q86X24 394 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 CILP2Q8IUL8 1156 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ARMC2Q8NEN0 867 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 OR4K2Q8NGD2 314 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 OR6K2Q8NGY2 324 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 FAM45AQ8TCE6 357 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZNF75CPQ92670 426 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 CDKN2AIPNLQ96HQ2 116 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 TBATAQ96M53 351 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 SLC46A1Q96NT5 459 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZNF317Q96PQ6 595 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 HEPHQ9BQS7 1158 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 DUSP23Q9BVJ7 150 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 OSBPL1AQ9BXW6 950 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZDHHC6Q9H6R6 413 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZFYVE1Q9HBF4 777 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 FBXO6Q9NRD1 293 aaPredicted RBP10.04□□□□□ -0.8
SS18-210ENST00000578700 NLGN3Q9NZ94 848 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 GGT7Q9UJ14 662 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 APPL1Q9UKG1 709 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 PHTF1Q9UMS5 762 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 ZNF711Q9Y462 761 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 KCTD3Q9Y597 815 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 SPO11Q9Y5K1 396 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 SLC30A1Q9Y6M5 507 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 KIF26BQ2KJY2 2108 aa10.04□□□□□ -0.8
SS18-210ENST00000578700 LY6G6EA0A0G2JKS1 128 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 A0A0J9YYE9 177 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 A0A1W2PNU3 283 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 PMS2P1A4D2B8 440 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 KLF11O14901 512 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 HTRA2O43464 458 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 BUD23O43709 281 aaKnown RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 H2AFYO75367 372 aaKnown RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 HAUS5O94927 633 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 TNFSF15O95150 251 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 PIGNO95427 931 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 PAK4O96013 591 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 PRLP01236 227 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 TRBC1P01850 177 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 C2P06681 752 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 GP1BAP07359 652 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 CYP2A6P11509 494 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 TAC1P20366 129 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 ARNTP27540 789 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 MAGEA12P43365 314 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 VASPP50552 380 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 CCNHP51946 323 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 RP1P56715 2156 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 HNRNPKP61978 463 aaKnown RBP eCLIP10.03□□□□□ -0.8
SS18-210ENST00000578700 NFKB2Q00653 900 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 ZKSCAN8Q15776 578 aaPredicted RBP10.03□□□□□ -0.8
SS18-210ENST00000578700 FAM83EQ2M2I3 478 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 DEFB133Q30KQ1 61 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 ZRANB3Q5FWF4 1079 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 PIP5KL1Q5T9C9 394 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 ZDHHC20Q5W0Z9 365 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 SEL1L3Q68CR1 1132 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 GUSBP11Q6P575 273 aa10.03□□□□□ -0.8
SS18-210ENST00000578700 BRAT1Q6PJG6 821 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms