RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SPAM1P38567 509 aa13□□□□□ -0.33
COPS3-214ENST00000577246 PREPP48147 710 aa13□□□□□ -0.33
COPS3-214ENST00000577246 KPNA2P52292 529 aaKnown RBP13□□□□□ -0.33
COPS3-214ENST00000577246 AP1B1Q10567 949 aa13□□□□□ -0.33
COPS3-214ENST00000577246 ABRQ12979 859 aa13□□□□□ -0.33
COPS3-214ENST00000577246 NFE2L1Q14494 772 aa13□□□□□ -0.33
COPS3-214ENST00000577246 SSPNQ14714 243 aa13□□□□□ -0.33
COPS3-214ENST00000577246 PPP2R5EQ16537 467 aa13□□□□□ -0.33
COPS3-214ENST00000577246 LCN10Q6JVE6 187 aa13□□□□□ -0.33
COPS3-214ENST00000577246 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
COPS3-214ENST00000577246 RBM43Q6ZSC3 357 aaKnown RBP13□□□□□ -0.33
COPS3-214ENST00000577246 MRGPREQ86SM8 312 aa13□□□□□ -0.33
COPS3-214ENST00000577246 GALNT16Q8N428 558 aa13□□□□□ -0.33
COPS3-214ENST00000577246 RASGEF1AQ8N9B8 481 aa13□□□□□ -0.33
COPS3-214ENST00000577246 DDHD1Q8NEL9 900 aa13□□□□□ -0.33
COPS3-214ENST00000577246 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
COPS3-214ENST00000577246 COG1Q8WTW3 980 aa13□□□□□ -0.33
COPS3-214ENST00000577246 LRRN4Q8WUT4 740 aa13□□□□□ -0.33
COPS3-214ENST00000577246 MARVELD3Q96A59 401 aa13□□□□□ -0.33
COPS3-214ENST00000577246 AGAP3Q96P47 875 aa13□□□□□ -0.33
COPS3-214ENST00000577246 BPIFA1Q9NP55 256 aa13□□□□□ -0.33
COPS3-214ENST00000577246 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
COPS3-214ENST00000577246 POMT2Q9UKY4 750 aa13□□□□□ -0.33
COPS3-214ENST00000577246 TMPRSS11EQ9UL52 423 aa13□□□□□ -0.33
COPS3-214ENST00000577246 SRPK3Q9UPE1 567 aa13□□□□□ -0.33
COPS3-214ENST00000577246 CFAP20Q9Y6A4 193 aaKnown RBP13□□□□□ -0.33
COPS3-214ENST00000577246 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
COPS3-214ENST00000577246 HEATR9A2RTY3 570 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 SLC9B1P1A6NJY1 282 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 E7EQ34 232 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 F5H423 210 aaPredicted RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 CAPN1P07384 714 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 SKILP12757 684 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 MSH3P20585 1137 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 AKT1P31749 480 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 GLRBP48167 497 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 SLC10A2Q12908 348 aaPredicted RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 GSE1Q14687 1217 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 PDK1Q15118 436 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 DCAF10Q5QP82 559 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 GPR135Q8IZ08 494 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 PQLC3Q8N755 202 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 BARD1Q99728 777 aaKnown RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 NAT10Q9H0A0 1025 aaKnown RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 IL26Q9NPH9 171 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 HACD3Q9P035 362 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 GPN3Q9UHW5 284 aaPredicted RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 PKP3Q9Y446 797 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 HEY1Q9Y5J3 304 aa12.99□□□□□ -0.33
COPS3-214ENST00000577246 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
COPS3-214ENST00000577246 CELSR2Q9HCU4 2923 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 A0A0A6YYK5 440 aaPredicted RBP12.98□□□□□ -0.33
COPS3-214ENST00000577246 GLYATL1P3A0A0U1RQE8 302 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 MGAT4DA6NG13 374 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
COPS3-214ENST00000577246 FOLR3P41439 243 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 CTSCP53634 463 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 FNBP1LQ5T0N5 605 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 FAM69BQ5VUD6 431 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 HGSNATQ68CP4 663 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 Q6ZS92 163 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 ACVR1CQ8NER5 493 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 OR2L2Q8NH16 312 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 N4BP2L2Q92802 583 aaPredicted RBP12.98□□□□□ -0.33
COPS3-214ENST00000577246 RNF157Q96PX1 679 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 INSM2Q96T92 566 aaPredicted RBP12.98□□□□□ -0.33
COPS3-214ENST00000577246 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
COPS3-214ENST00000577246 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 SRMSQ9H3Y6 488 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 SMOXQ9NWM0 555 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 CENPEQ02224 2701 aa12.98□□□□□ -0.33
COPS3-214ENST00000577246 CACNA1DQ01668 2161 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 ARHGAP10A1A4S6 786 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 AURKAO14965 403 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 LRRTM2O43300 516 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 LDB2O43679 373 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 PMPCBO75439 489 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 PROSCO94903 275 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 LCA5LO95447 670 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
COPS3-214ENST00000577246 ARCN1P48444 511 aaKnown RBP12.97□□□□□ -0.33
COPS3-214ENST00000577246 ZNF789Q5FWF6 425 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 GPRC6AQ5T6X5 926 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 FAM151BQ6UXP7 276 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms