RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MCUQ8NE86 351 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 FLVCR1-AS1Q8TAF5 88 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 GDAP1Q8TB36 358 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 JPH3Q8WXH2 748 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 LPGAT1Q92604 370 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 MAGOHBQ96A72 148 aaKnown RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 ZNF578Q96N58 590 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 BIRC8Q96P09 236 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 IL22Q9GZX6 179 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 RAB33BQ9H082 229 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 ABCG4Q9H172 646 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 SYNDIG1Q9H7V2 258 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 EPB41L5Q9HCM4 733 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 KCNK4Q9NYG8 393 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 IL1RAPL1Q9NZN1 696 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 PSMD13Q9UNM6 376 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 CFAP20Q9Y6A4 193 aaKnown RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 HEATR5BQ9P2D3 2071 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 PDZK1P1A8MUH7 402 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 EFSO43281 561 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 DUX1O43812 170 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 KIF1CO43896 1103 aaKnown RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 PRAMEF10O60809 474 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 GPC4O75487 556 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 BANF1O75531 89 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 AP2A2O94973 939 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 SLC2A4P14672 509 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 WT1P19544 449 aaPredicted RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 IDSP22304 550 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 CCR7P32248 378 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 NSG1P42857 185 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 GNG11P61952 73 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 CBLBQ13191 982 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 CLN3Q13286 438 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 GTF2H3Q13889 308 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 BOP1Q14137 746 aaKnown RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 ZRANB3Q5FWF4 1079 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 ARMC3Q5W041 872 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 PCSK4Q6UW60 755 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 NAPRTQ6XQN6 538 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 CENPUQ71F23 418 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 ZNF572Q7Z3I7 529 aaPredicted RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 PRSS42Q7Z5A4 293 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 SLC9B2Q86UD5 537 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 PIM3Q86V86 326 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 RASGRP3Q8IV61 690 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 IGDCC3Q8IVU1 814 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 SPACA3Q8IXA5 215 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 UNC5BQ8IZJ1 945 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 DNAAF3Q8N9W5 541 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 PPHLN1Q8NEY8 458 aaKnown RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 OR4L1Q8NH43 312 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 GIMAP7Q8NHV1 300 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 PPM1MQ96MI6 270 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 TMEM74Q96NL1 305 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 NAPGQ99747 312 aaPredicted RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 TRIM51Q9BSJ1 452 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 KIR3DX1Q9H7L2 352 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 OCIAD1Q9NX40 245 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 EPHA6Q9UF33 1036 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 SLC24A2Q9UI40 661 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 RALYQ9UKM9 306 aaKnown RBP8.47□□□□□ -1.05
SMG6-216ENST00000575176 PCDHGA3Q9Y5H0 932 aa8.47□□□□□ -1.05
SMG6-216ENST00000575176 MDC1Q14676 2089 aaKnown RBP8.46□□□□□ -1.05
SMG6-216ENST00000575176 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 KLHL33A6NCF5 533 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 OR5K3A6NET4 321 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 IQCF5A8MTL0 148 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 GOLGA8KD6RF30 607 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 E7EVH7 732 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 GOLGA8TH3BQL2 631 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 DNALI1O14645 258 aaPredicted RBP8.46□□□□□ -1.06
SMG6-216ENST00000575176 UBXN7O94888 489 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 TNFSF15O95150 251 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 RPS3P23396 243 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-216ENST00000575176 PEBP1P30086 187 aaKnown RBP8.46□□□□□ -1.06
SMG6-216ENST00000575176 SLC5A2P31639 672 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 NPY2RP49146 381 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 TERF1P54274 439 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
SMG6-216ENST00000575176 TIAL1Q01085 375 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-216ENST00000575176 TRA2AQ13595 282 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-216ENST00000575176 SKIDA1Q1XH10 827 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 COL28A1Q2UY09 1125 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 ZNF549Q6P9A3 640 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 NLRP9Q7RTR0 991 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 GSTA5Q7RTV2 222 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 JAMLQ86YT9 394 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 RBM12BQ8IXT5 1001 aaKnown RBP8.46□□□□□ -1.06
SMG6-216ENST00000575176 AVL9Q8NBF6 648 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 HEXDCQ8WVB3 486 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 FGF11Q92914 225 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 C9orf72Q96LT7 481 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 PWWP2AQ96N64 755 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms