RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 C4orf47A7E2U8 309 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 PDZK1P1A8MUH7 402 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 SLC35G4P0C7Q5 338 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 GIMD1P0DJR0 217 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 F3P13726 295 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 FDXRP22570 491 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 CLCN7P51798 805 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 STPG1Q5TH74 334 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 ZCCHC8Q6NZY4 707 aaKnown RBP16.75■□□□□ 0.27
NUP88-210ENST00000574867 ZBTB2Q8N680 514 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 SARS2Q9NP81 518 aaKnown RBP16.75■□□□□ 0.27
NUP88-210ENST00000574867 TBC1D29Q9UFV1 150 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 SLC24A2Q9UI40 661 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 TRMT6Q9UJA5 497 aaKnown RBP16.75■□□□□ 0.27
NUP88-210ENST00000574867 VWA7Q9Y334 891 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 RIF1Q5UIP0 2472 aaKnown RBP16.75■□□□□ 0.27
NUP88-210ENST00000574867 FAM186AA6NE01 2351 aa16.75■□□□□ 0.27
NUP88-210ENST00000574867 COL5A1P20908 1838 aaPredicted RBP16.75■□□□□ 0.27
NUP88-210ENST00000574867 A6NCN8 305 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 POC1B-GALNT4F8VUJ3 575 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 GDF9O60383 454 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 SNX2O60749 519 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 GPC4O75487 556 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 ITGA2BP08514 1039 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 CNTFP26441 200 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 ATP5DP30049 168 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 HALP42357 657 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 POU4F1Q01851 419 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 UAP1L1Q3KQV9 507 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 ABRAXAS1Q6UWZ7 409 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 XKR5Q6UX68 686 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 ZDHHC1Q8WTX9 485 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 MRRFQ96E11 262 aaKnown RBP16.74■□□□□ 0.27
NUP88-210ENST00000574867 TSPAN17Q96FV3 270 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 GPR21Q99679 349 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 DHRS4Q9BTZ2 278 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 ARGLU1Q9NWB6 273 aaPredicted RBP16.74■□□□□ 0.27
NUP88-210ENST00000574867 DHRS7Q9Y394 339 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 OR5K4A6NMS3 321 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 B4DGG1 531 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 FAM155BO75949 473 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 SLC12A2P55011 1212 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 CDKN2DP55273 166 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 HSPA14Q0VDF9 509 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 SEPT7Q16181 437 aaKnown RBP16.74■□□□□ 0.27
NUP88-210ENST00000574867 ARL10Q8N8L6 244 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 AVL9Q8NBF6 648 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 CD200R1Q8TD46 325 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 NETO1Q8TDF5 533 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 FAM136AQ96C01 138 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 OR52A5Q9H2C5 316 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 POPDC3Q9HBV1 291 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 PRDM8Q9NQV8 689 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 NCKIPSDQ9NZQ3 722 aa16.74■□□□□ 0.27
NUP88-210ENST00000574867 KIR2DS5A0A0G2JLQ3 304 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 A0A0G2JNG1 304 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 KIR2DS3K7RE56 304 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 EIF3FO00303 357 aaPredicted RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 KRT38O76015 456 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 SLCO2B1O94956 709 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 CD59P13987 128 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 RPL10P27635 214 aaKnown RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 PREPP48147 710 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 PDAP1Q13442 181 aaKnown RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 GBX1Q14549 363 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 KIR2DS5Q14953 304 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 SLC22A15Q8IZD6 547 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 LILRA3Q8N6C8 439 aaPredicted RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 FAM181AQ8N9Y4 354 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 SIDT2Q8NBJ9 832 aaKnown RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 DCAKDQ8WVC6 231 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 INPP5DQ92835 1189 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 PSMC3IPQ9P2W1 217 aaPredicted RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 MTO1Q9Y2Z2 717 aaKnown RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 GVINP1Q7Z2Y8 2422 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 IFRD1O00458 451 aaPredicted RBP16.73■□□□□ 0.27
NUP88-210ENST00000574867 TCEA3O75764 348 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 SHBGP04278 402 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 CBSLP0DN79 551 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 CBSP35520 551 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 LGSNQ5TDP6 509 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 LRRC8EQ6NSJ5 796 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 OGFOD3Q6PK18 319 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 PDZD3Q86UT5 571 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 NAXDQ8IW45 347 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 EID2Q8N6I1 236 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 GIMAP7Q8NHV1 300 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 OLFM1Q99784 485 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 WWP1Q9H0M0 922 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 SLC39A10Q9ULF5 831 aa16.73■□□□□ 0.27
NUP88-210ENST00000574867 ZNF292O60281 2723 aa16.72■□□□□ 0.27
NUP88-210ENST00000574867 ARHGEF17Q96PE2 2063 aaPredicted RBP16.72■□□□□ 0.27
NUP88-210ENST00000574867 TRIM38O00635 465 aa16.72■□□□□ 0.27
NUP88-210ENST00000574867 KRT37O76014 449 aa16.72■□□□□ 0.27
NUP88-210ENST00000574867 ENO3P13929 434 aaPredicted RBP16.72■□□□□ 0.27
NUP88-210ENST00000574867 GCAP28676 217 aa16.72■□□□□ 0.27
NUP88-210ENST00000574867 TIAL1Q01085 375 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms