RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 NT5C3AQ9H0P0 336 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 HSD3B7Q9H2F3 369 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 C17orf75Q9HAS0 396 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 Q9N2J8 555 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 POLE3Q9NRF9 147 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 SEPT10Q9P0V9 454 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 MALT1Q9UDY8 824 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 APPL1Q9UKG1 709 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 PCDHGA5Q9Y5G8 931 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 PCDHGA1Q9Y5H4 931 aa4.67□□□□□ -1.66
CHD9-220ENST00000569794 MAGEA13PA6NCF6 341 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 LRRC72A6NJI9 287 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 GPR89AB7ZAQ6 455 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 H0YC42 278 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CACNB4O00305 520 aaPredicted RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 HSPB6O14558 160 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 SLC25A17O43808 307 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 XPNPEP2O43895 674 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 VEGFDO43915 354 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CEP104O60308 925 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 TRIM16O95361 564 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 SRPRAP08240 638 aaKnown RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 GPR89BP0CG08 455 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 ENO3P13929 434 aaPredicted RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 TMEM11P17152 192 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 HOXB9P17482 250 aaPredicted RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 TMOD1P28289 359 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 MXI1P50539 228 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 ATXN3P54252 364 aaPredicted RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 F2RL1P55085 397 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 STX1BP61266 288 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 KCNJ10P78508 379 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 MYBPHQ13203 477 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 SGCGQ13326 291 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 TAZQ16635 292 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 AP5B1Q2VPB7 878 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 HFEQ30201 348 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 C6orf163Q5TEZ5 329 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 KRT39Q6A163 491 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 C16orf87Q6PH81 154 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CCBE1Q6UXH8 406 aaPredicted RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 MIER3Q7Z3K6 550 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 ZNF114Q8NC26 417 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CNNM3Q8NE01 707 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 GMCL1P1Q8NEA9 526 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 BRSK1Q8TDC3 778 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 GAL3ST4Q96RP7 486 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 TXN2Q99757 166 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CACNG6Q9BXT2 260 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 PLK3Q9H4B4 646 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 C20orf141Q9NUB4 165 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CNIH4Q9P003 139 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 CWC15Q9P013 229 aaKnown RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 DLGAP2Q9P1A6 1054 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 HSPB7Q9UBY9 170 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 KLQ9UEF7 1012 aa4.66□□□□□ -1.66
CHD9-220ENST00000569794 RPH3AQ9Y2J0 694 aaPredicted RBP4.66□□□□□ -1.66
CHD9-220ENST00000569794 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 CTAGE9A4FU28 777 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 CCDC169A6NNP5 214 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 AP3B1O00203 1094 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 SLC33A1O00400 549 aaPredicted RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 PAPSS1O43252 624 aaPredicted RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 HBP1O60381 514 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 DDHD2O94830 711 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 CLDN7O95471 211 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 DDAH2O95865 285 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 OPN1MWP04001 364 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ALPPP05187 535 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 CFC1BP0CG36 223 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 CFC1P0CG37 223 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 OPN1MW2P0DN77 364 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 OPN1MW3P0DN78 364 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ALPPL2P10696 532 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 TOP1P11387 765 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 CYP4B1P13584 511 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 TRIM21P19474 475 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 AGAP20933 346 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 POU1F1P28069 291 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ACAA2P42765 397 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 MVDP53602 400 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 GALCP54803 685 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ALKBH1Q13686 389 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 BYSLQ13895 437 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 ZNF273Q14593 569 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 RRS1Q15050 365 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 C12orf60Q5U649 245 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 NAPEPLDQ6IQ20 393 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 KLHL10Q6JEL2 608 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ZCCHC12Q6PEW1 402 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 GLDNQ6ZMI3 551 aaPredicted RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 MARK2Q7KZI7 788 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 KCTD9Q7L273 389 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 SPATA21Q7Z572 469 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 TADA2BQ86TJ2 420 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 CEP57Q86XR8 500 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ZDHHC23Q8IYP9 409 aa4.65□□□□□ -1.67
CHD9-220ENST00000569794 ENDOVQ8N8Q3 282 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 MRPL43Q8N983 215 aaKnown RBP4.65□□□□□ -1.67
CHD9-220ENST00000569794 TEX45Q8NA69 505 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms