RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR13C4Q8NGS5 318 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 KCNE4Q8WWG9 221 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 DCUN1D1Q96GG9 259 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 CCDC74BQ96LY2 380 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 DPYSL5Q9BPU6 564 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 SMOXQ9NWM0 555 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 PIH1D1Q9NWS0 290 aaKnown RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 BFARQ9NZS9 450 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 CRLS1Q9UJA2 301 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 TEX264Q9Y6I9 313 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 BPTFQ12830 3046 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 IGHV5-10-1A0A0J9YXX1 117 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CCL22O00626 93 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 KLK10O43240 276 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 RALBP11234 206 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 ITGALP20701 1170 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 PBLDP30039 288 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CA5AP35218 305 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF140P52738 457 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CTSCP53634 463 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 MAPK10P53779 464 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 SESN2P58004 480 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 MSLNQ13421 630 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 POU6F1Q14863 301 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CCDC38Q502W7 563 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 SNAP47Q5SQN1 464 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 BROXQ5VW32 411 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF574Q6ZN55 896 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 SPACA3Q8IXA5 215 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 RCBTB1Q8NDN9 531 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 OR4D9Q8NGE8 314 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 NCSTNQ92542 709 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 ULK4Q96C45 1275 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CXorf40BQ96DE9 158 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 SGF29Q96ES7 293 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CCDC97Q96F63 343 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 EBNA1BP2Q99848 306 aaKnown RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 WDR83Q9BRX9 315 aaKnown RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 NAT9Q9BTE0 207 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 IL22Q9GZX6 179 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 CDC42EP4Q9H3Q1 356 aaKnown RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 FAM96AQ9H5X1 160 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 SCHIP1Q9P0W5 487 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-225ENST00000569245 SLC30A1Q9Y6M5 507 aa14.21□□□□□ -0.13
COMMD4-225ENST00000569245 MAGEB16A2A368 324 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 CDRT15L2A8MXV6 281 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 LDB2O43679 373 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 KCNJ13O60928 360 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 BANF1O75531 89 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 XRCC1P18887 633 aaPredicted RBP14.2□□□□□ -0.14
COMMD4-225ENST00000569245 ITIH1P19827 911 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 MGAT1P26572 445 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 SLC5A2P31639 672 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 CSF2RBP32927 897 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 CSTF2P33240 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
COMMD4-225ENST00000569245 ELK3P41970 407 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 HALP42357 657 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 LIMK2P53671 638 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 SQSTM1Q13501 440 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 C16orf72Q14CZ0 275 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 FASTKD3Q14CZ7 662 aaKnown RBP14.2□□□□□ -0.14
COMMD4-225ENST00000569245 TMEM71Q6P5X7 295 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 TAS2R42Q7RTR8 314 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 PDZD3Q86UT5 571 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 FBXO36Q8NEA4 188 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 PYROXD1Q8WU10 500 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 CRELD1Q96HD1 420 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 ZNF514Q96K75 400 aaPredicted RBP14.2□□□□□ -0.14
COMMD4-225ENST00000569245 DNAJC1Q96KC8 554 aaKnown RBP14.2□□□□□ -0.14
COMMD4-225ENST00000569245 C9orf72Q96LT7 481 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 TBC1D10AQ9BXI6 508 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 SYBUQ9NX95 663 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 NINJ2Q9NZG7 142 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
COMMD4-225ENST00000569245 ARHGEF17Q96PE2 2063 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 CCDC78A2IDD5 438 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 OR52A4PA6NMU1 304 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 A8MU76 341 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 CFAP99D6REC4 459 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 HGSO14964 777 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 TTC4O95801 387 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 MC4RP32245 332 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 HSD17B3P37058 310 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 SLC19A1P41440 591 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 EPHA4P54764 986 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 UBE2IP63279 158 aaKnown RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 XIAPP98170 497 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 CFHR1Q03591 330 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 TLE3Q04726 772 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 TRA2AQ13595 282 aaKnown RBP eCLIP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 UAP1Q16222 522 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 ZRANB3Q5FWF4 1079 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 PCID2Q5JVF3 399 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 TMEM164Q5U3C3 297 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 AGAP9Q5VTM2 703 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 WDR74Q6RFH5 385 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 ABRAXAS1Q6UWZ7 409 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 WASH2PQ6VEQ5 465 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms