RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SLC9B1P1A6NJY1 282 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 LRRC53A6NM62 1247 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 MATN2O00339 956 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 PEX12O00623 359 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 LRRTM2O43300 516 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 LCA5LO95447 670 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 HBQ1P09105 142 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 CDK11BP21127 795 aaKnown RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 AGXTP21549 392 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 OTX2P32243 289 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 CA5AP35218 305 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 SOX8P57073 446 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 IFI35P80217 286 aaPredicted RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 GBE1Q04446 702 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 NFE2L1Q14494 772 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 SLC14A2Q15849 920 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 HADHQ16836 314 aaKnown RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 PTCHD3Q3KNS1 767 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 METRNLQ641Q3 311 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 FBXO38Q6PIJ6 1188 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 FAM83HQ6ZRV2 1179 aaPredicted RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 CUZD1Q86UP6 607 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 KCNMB4Q86W47 210 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 BEND7Q8N7W2 519 aaPredicted RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 RASGEF1AQ8N9B8 481 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 CCNYQ8ND76 341 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 OR1L3Q8NH93 324 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 LRRN4Q8WUT4 740 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 FAF2Q96CS3 445 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 IMP4Q96G21 291 aaKnown RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 PPM1MQ96MI6 270 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 INSM2Q96T92 566 aaPredicted RBP12.13□□□□□ -0.47
SNX29-207ENST00000568949 TLR10Q9BXR5 811 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 KIR3DX1Q9H7L2 352 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 SERTAD3Q9UJW9 196 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 POMT2Q9UKY4 750 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 FER1L5A0AVI2 2057 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 TMEM150CB9EJG8 249 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 KCNK1O00180 336 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 KLF7O75840 302 aaPredicted RBP12.12□□□□□ -0.47
SNX29-207ENST00000568949 CD63P08962 238 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 CDH3P22223 829 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 PREPP48147 710 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 CTSCP53634 463 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 MYL5Q02045 173 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 PPIDQ08752 370 aaKnown RBP12.12□□□□□ -0.47
SNX29-207ENST00000568949 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 SLC10A2Q12908 348 aaPredicted RBP12.12□□□□□ -0.47
SNX29-207ENST00000568949 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 PDK2Q15119 407 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 LLGL1Q15334 1064 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 LDLRAP1Q5SW96 308 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 ZDHHC20Q5W0Z9 365 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 ZNF385CQ66K41 422 aaPredicted RBP12.12□□□□□ -0.47
SNX29-207ENST00000568949 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 CCDC70Q6NSX1 233 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 TMEM220Q6QAJ8 160 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 SPOCD1Q6ZMY3 1216 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 NT5DC3Q86UY8 548 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 TADA1Q96BN2 335 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 ZNF830Q96NB3 372 aaPredicted RBP12.12□□□□□ -0.47
SNX29-207ENST00000568949 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 CBX8Q9HC52 389 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 IL26Q9NPH9 171 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNX29-207ENST00000568949 ANAPC7Q9UJX3 599 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 CFAP20Q9Y6A4 193 aaKnown RBP12.12□□□□□ -0.47
SNX29-207ENST00000568949 COLEC10Q9Y6Z7 277 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
SNX29-207ENST00000568949 PCM1Q15154 2024 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 MYO7BQ6PIF6 2116 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 SETD2Q9BYW2 2564 aaPredicted RBP12.11□□□□□ -0.47
SNX29-207ENST00000568949 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 A0A1B0GUH1 482 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 PRSS44E7EML9 344 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 MYO1FO00160 1098 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 E2F3O00716 465 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 AURKAO14965 403 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 MAP3K7O43318 606 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 ZG16O60844 167 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 NDST3O95803 873 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 EDN3P14138 238 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 POLR2CP19387 275 aaPredicted RBP12.11□□□□□ -0.47
SNX29-207ENST00000568949 HLA-DPA1P20036 260 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 NDUFS1P28331 727 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 HMGCLP35914 325 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 SSR1P43307 286 aaKnown RBP12.11□□□□□ -0.47
SNX29-207ENST00000568949 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
SNX29-207ENST00000568949 PCSK7Q16549 785 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
SNX29-207ENST00000568949 E4F1Q66K89 784 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms