RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 BBC3Q96PG8 261 aaPredicted RBP12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 INSM2Q96T92 566 aaPredicted RBP12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 SPRY4Q9C004 299 aa12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 ZNF768Q9H5H4 540 aaKnown RBP12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 VPS37BQ9H9H4 285 aa12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 BAHCC1Q9P281 2608 aa12.36□□□□□ -0.43
LPCAT4-206ENST00000566581 ANKRD12Q6UB98 2062 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 ERVH48-1M5A8F1 160 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 AP3B1O00203 1094 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 QSOX1O00391 747 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 NDUFS1P28331 727 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 CXCR5P32302 372 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 FOXN2P32314 431 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 NSG1P42857 185 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 CD151P48509 253 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 CDK16Q00536 496 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 RPA4Q13156 261 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 ITIH4Q14624 930 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 DBN1Q16643 649 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 CCDC38Q502W7 563 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 TSTD2Q5T7W7 516 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 LYPLAL1Q5VWZ2 237 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 CEACAM20Q6UY09 585 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 PRSS42Q7Z5A4 293 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 PRUNE1Q86TP1 453 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 GPR150Q8NGU9 434 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 NAT14Q8WUY8 206 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 KLHL6Q8WZ60 621 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 PMEPA1Q969W9 287 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 C12orf66Q96MD2 445 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 TGM7Q96PF1 710 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 KIR3DX1Q9H7L2 352 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 IMP3Q9NV31 184 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 SIDT1Q9NXL6 827 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 KLHL3Q9UH77 587 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 HEBP2Q9Y5Z4 205 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 COLEC10Q9Y6Z7 277 aa12.35□□□□□ -0.43
LPCAT4-206ENST00000566581 CCDC162PA2VCL2 907 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 GOLGA6L3A6NEY3 463 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 POLBP06746 335 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 ZSCAN5DPP0CG00 497 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 KCNJ1P48048 391 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 LEPRP48357 1165 aaKnown RBP12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 MANEAQ5SRI9 462 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 ANKS6Q68DC2 871 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 ZNF449Q6P9G9 518 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 CERS6Q6ZMG9 384 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 GSTA5Q7RTV2 222 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 CLDN19Q8N6F1 224 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 PRELID2Q8N945 189 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 NKD1Q969G9 470 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 HDAC10Q969S8 669 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 PBKQ96KB5 322 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 RMDN2Q96LZ7 410 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 TTC1Q99614 292 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 OR52A5Q9H2C5 316 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 SLC24A2Q9UI40 661 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 PILRAQ9UKJ1 303 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 TCAF1Q9Y4C2 921 aa12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
LPCAT4-206ENST00000566581 POLR1CO15160 346 aaPredicted RBP12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 PRSS56P0CW18 603 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 NELFEP18615 380 aaKnown RBP12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 NPY2RP49146 381 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 ATP1A2P50993 1020 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 IL11RAQ14626 422 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 GSE1Q14687 1217 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 PCID2Q5JVF3 399 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 CACHD1Q5VU97 1274 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 ARMC3Q5W041 872 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 IRGCQ6NXR0 463 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 AFTPHQ6ULP2 937 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 KMT5CQ86Y97 462 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 CARFQ8N187 725 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 LILRA3Q8N6C8 439 aaPredicted RBP12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 OR4L1Q8NH43 312 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 UBXN4Q92575 508 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 TTC9Q92623 222 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 SLC41A2Q96JW4 573 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 ZNF778Q96MU6 729 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 CD180Q99467 661 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 IL22Q9GZX6 179 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 TRIT1Q9H3H1 467 aaKnown RBP12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 COG4Q9H9E3 785 aa12.33□□□□□ -0.44
LPCAT4-206ENST00000566581 SMARCAL1Q9NZC9 954 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms