RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZNF497Q6ZNH5 498 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 STXBP4Q6ZWJ1 553 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 DPPA4Q7L190 304 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 MTERF4Q7Z6M4 381 aaKnown RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 TRPT1Q86TN4 253 aaKnown RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 MAP7D3Q8IWC1 876 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 LYG1Q8N1E2 194 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 TRIM44Q96DX7 344 aaPredicted RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 ACOX2Q99424 681 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 LBHD1Q9BQE6 289 aaPredicted RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 SLC26A6Q9BXS9 759 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 USP44Q9H0E7 712 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 SIL1Q9H173 461 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 SEBOXQ9HB31 216 aaPredicted RBP3.98□□□□□ -1.77
CHD9-212ENST00000564641 HAO1Q9UJM8 370 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 NUDCQ9Y266 331 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 SMAD5-AS1Q9Y6J3 95 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 RNF215Q9Y6U7 377 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 TRPM1Q7Z4N2 1603 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 CRYBG1Q9Y4K1 1723 aa3.98□□□□□ -1.77
CHD9-212ENST00000564641 NRKQ7Z2Y5 1582 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 CHD4Q14839 1912 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 RREB1Q92766 1687 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 CPSF1Q10570 1443 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 SMG6Q86US8 1419 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 A0A1W2PPI3 338 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 A0A1W2PQM1 296 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 NR5A2O00482 541 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 RNASEH2AO75792 299 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 CD4P01730 458 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 ERVK-10P10266 1014 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 UBA1P22314 1058 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 KRT9P35527 623 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 TRPC3Q13507 836 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 OLIG2Q13516 323 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 FGFBP1Q14512 234 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 KIR2DS3Q14952 304 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 TECRLQ5HYJ1 363 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 FAAP20Q6NZ36 180 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 ACVR1CQ8NER5 493 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 HDAC2Q92769 488 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 RHBDF1Q96CC6 855 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 SAAL1Q96ER3 474 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 MAELQ96JY0 434 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 TMEM68Q96MH6 324 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 LRMDAQ9H2I8 198 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 SLC52A3Q9NQ40 469 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 UBA2Q9UBT2 640 aaPredicted RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 PADI3Q9ULW8 664 aa3.97□□□□□ -1.77
CHD9-212ENST00000564641 KTN1Q86UP2 1357 aaKnown RBP3.97□□□□□ -1.77
CHD9-212ENST00000564641 RNF123Q5XPI4 1314 aa3.96□□□□□ -1.77
CHD9-212ENST00000564641 NSD3Q9BZ95 1437 aa3.96□□□□□ -1.77
CHD9-212ENST00000564641 FAM90A26D6RGX4 464 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ANKRD28O15084 1053 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 BAG4O95429 457 aaKnown RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 POLBP06746 335 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 GNB3P16520 340 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ZNF182P17025 639 aaPredicted RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 UGT1A1P22309 533 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 NR2F2P24468 414 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 HOXA13P31271 388 aaPredicted RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 PAFAH1B1P43034 410 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 EIF3BP55884 814 aaKnown RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 CLDN20P56880 219 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 NEXNQ0ZGT2 675 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ITGA9Q13797 1035 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 SLC15A2Q16348 729 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ASPRV1Q53RT3 343 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 TAF3Q5VWG9 929 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 HIST2H2BDQ6DRA6 164 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 FAM180BQ6P0A1 224 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 PAPD4Q6PIY7 484 aaKnown RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 C15orf39Q6ZRI6 1047 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 NOTCH2NLQ7Z3S9 236 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ANP32BQ92688 251 aaKnown RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 HTRA1Q92743 480 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 PHF21AQ96BD5 680 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ZNF599Q96NL3 588 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 PYGO2Q9BRQ0 406 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ZBTB20Q9HC78 741 aaPredicted RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 SLC6A13Q9NSD5 602 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ZDHHC18Q9NUE0 388 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 ADPRHL2Q9NX46 363 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 RPS6KL1Q9Y6S9 549 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 LMO7Q8WWI1 1683 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 FAM208AQ9UK61 1670 aaKnown RBP3.96□□□□□ -1.78
CHD9-212ENST00000564641 CAMTA1Q9Y6Y1 1673 aa3.96□□□□□ -1.78
CHD9-212ENST00000564641 TNS2Q63HR2 1409 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 SLIT3O75094 1523 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 NUP188Q5SRE5 1749 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 TONSLQ96HA7 1378 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 MAP3K5Q99683 1374 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 OR5K3A6NET4 321 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 A6NLC8 198 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 H0YIN7 160 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 M0QZ24 198 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 CLIC2O15247 247 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 TIMM44O43615 452 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 CIDEAO60543 219 aa3.95□□□□□ -1.78
CHD9-212ENST00000564641 TMEM63AO94886 807 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms