RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 FAM84BQ96KN1 310 aaPredicted RBP4.51□□□□□ -1.69
LINC00560-201ENST00000564593 FNDC11Q9BVV2 318 aa4.51□□□□□ -1.69
LINC00560-201ENST00000564593 SLA2Q9H6Q3 261 aa4.51□□□□□ -1.69
LINC00560-201ENST00000564593 NOL11Q9H8H0 719 aaKnown RBP4.51□□□□□ -1.69
LINC00560-201ENST00000564593 ANKZF1Q9H8Y5 726 aa4.51□□□□□ -1.69
LINC00560-201ENST00000564593 CNOT10Q9H9A5 744 aaKnown RBP4.51□□□□□ -1.69
LINC00560-201ENST00000564593 RHCGQ9UBD6 479 aa4.51□□□□□ -1.69
LINC00560-201ENST00000564593 POU2F3Q9UKI9 436 aa4.51□□□□□ -1.69
LINC00560-201ENST00000564593 RALYQ9UKM9 306 aaKnown RBP4.51□□□□□ -1.69
LINC00560-201ENST00000564593 CGNL1Q0VF96 1302 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 SAA2-SAA4A0A096LPE2 208 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 ANKUB1A6NFN9 424 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 SLCO2B1O94956 709 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 FYNP06241 537 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 KRT19P08727 400 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 CDH1P12830 882 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 THBS3P49746 956 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 ZNF75DP51815 510 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 NANOS2P60321 138 aaKnown RBP4.5□□□□□ -1.69
LINC00560-201ENST00000564593 TROAPQ12815 778 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 HSPB3Q12988 150 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 ZBTB17Q13105 803 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 COG2Q14746 738 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 RNASEH2BQ5TBB1 312 aaKnown RBP4.5□□□□□ -1.69
LINC00560-201ENST00000564593 PAPD5Q8NDF8 572 aaKnown RBP4.5□□□□□ -1.69
LINC00560-201ENST00000564593 RDM1Q8NG50 284 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 NUDCD2Q8WVJ2 157 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 SMPDL3BQ92485 455 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 ARSGQ96EG1 525 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 OXNAD1Q96HP4 312 aaPredicted RBP4.5□□□□□ -1.69
LINC00560-201ENST00000564593 THOC3Q96J01 351 aaKnown RBP4.5□□□□□ -1.69
LINC00560-201ENST00000564593 HIPK2Q9H2X6 1198 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 ST6GALNAC4Q9H4F1 302 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 MBNL1Q9NR56 388 aaKnown RBP4.5□□□□□ -1.69
LINC00560-201ENST00000564593 MIOSQ9NXC5 875 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 NPAP1Q9NZP6 1156 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 SLC24A2Q9UI40 661 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 ANAPC5Q9UJX4 755 aa4.5□□□□□ -1.69
LINC00560-201ENST00000564593 PRSS51A0A1B0GVH4 220 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 A0A1W2PRQ8 180 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 TBCAO75347 108 aaKnown RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 MED24O75448 989 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 C22orf31O95567 290 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 QDPRP09417 244 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 GM2AP17900 193 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 ERCC2P18074 760 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 TNFRSF8P28908 595 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 IL15P40933 162 aaPredicted RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 PSMC4P43686 418 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 ARCN1P48444 511 aaKnown RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 ART1P52961 327 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 POU5F1Q01860 360 aaKnown RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 TNIP1Q15025 636 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 NADSYN1Q6IA69 706 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 FAM171BQ6P995 826 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 FAM47EQ6ZV65 393 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 ARMC9Q7Z3E5 817 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 CENPVQ7Z7K6 275 aaPredicted RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 PI4KAP1Q8N8J0 262 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 MTERF3Q96E29 417 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 TTC14Q96N46 770 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 NAA11Q9BSU3 229 aaPredicted RBP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 NUP85Q9BW27 656 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 DPAGT1Q9H3H5 408 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 TBC1D17Q9HA65 648 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 LRRC4Q9HBW1 653 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 SH3GLB2Q9NR46 395 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 SELENONQ9NZV5 590 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 TUBE1Q9UJT0 475 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 DLGAP4Q9Y2H0 992 aa4.49□□□□□ -1.69
LINC00560-201ENST00000564593 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00560-201ENST00000564593 IGHV4OR15-8A0A075B7B6 117 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 DVL1O14640 695 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 GPR137BO60478 399 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 TOMM70O94826 608 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 GCNT3O95395 438 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 LDLRP01130 860 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PCGF2P35227 344 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 MLLT10P55197 1068 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 ZXDBP98169 803 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 KRT39Q6A163 491 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 KLC3Q6P597 504 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 IL27RAQ6UWB1 636 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 UNQ6126/PRO20091Q6UXV3 157 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 C16orf82Q7Z2V1 217 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PTOV1Q86YD1 416 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 MUC20Q8N307 709 aaPredicted RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 LINGO1Q96FE5 620 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 SPATA17Q96L03 361 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 ABHD6Q9BV23 337 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 EDEM3Q9BZQ6 932 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 WNT5BQ9H1J7 359 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 C6orf106Q9H6K1 298 aaPredicted RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 CD93Q9NPY3 652 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 PRMT7Q9NVM4 692 aaPredicted RBP4.48□□□□□ -1.69
LINC00560-201ENST00000564593 STK26Q9P289 416 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 ELOVL7A1L3X0 281 aa4.48□□□□□ -1.69
LINC00560-201ENST00000564593 CELF2O95319 508 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms