RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FFAR4Q5NUL3 377 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 GAGE2AQ6NT46 116 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 FAM180BQ6P0A1 224 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 FASTKD5Q7L8L6 764 aaKnown RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 ARID3BQ8IVW6 561 aaPredicted RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 TBC1D16Q8TBP0 767 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 DAZLQ92904 295 aaKnown RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 MOAP1Q96BY2 351 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 GAGE2DQ9UEU5 116 aa4.35□□□□□ -1.71
UBR1-205ENST00000564540 MRPS28Q9Y2Q9 187 aaKnown RBP4.35□□□□□ -1.71
UBR1-205ENST00000564540 PSMD14O00487 310 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 NDUFS4O43181 175 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 RSL1D1O76021 490 aaKnown RBP4.34□□□□□ -1.71
UBR1-205ENST00000564540 CSPG5O95196 566 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 NADKO95544 446 aaPredicted RBP4.34□□□□□ -1.71
UBR1-205ENST00000564540 NGFP01138 241 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 H1F0P07305 194 aaKnown RBP4.34□□□□□ -1.71
UBR1-205ENST00000564540 CEACAM1P13688 526 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 ZNF26P17031 533 aaPredicted RBP4.34□□□□□ -1.71
UBR1-205ENST00000564540 CDH11P55287 796 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 GCNT6Q5T4J0 391 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 MAATS1Q7Z4T9 603 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 ISCA2Q86U28 154 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 GPALPP1Q8IXQ4 340 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 PGAM5Q96HS1 289 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 DACH2Q96NX9 599 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 C1QTNF1Q9BXJ1 281 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 EIF2B3Q9NR50 452 aaKnown RBP4.34□□□□□ -1.71
UBR1-205ENST00000564540 OLFML3Q9NRN5 406 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 ECHDC1Q9NTX5 307 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 DISP3Q9P2K9 1392 aa4.34□□□□□ -1.71
UBR1-205ENST00000564540 F5H0A9 414 aaPredicted RBP4.33□□□□□ -1.72
UBR1-205ENST00000564540 ZNF500O60304 480 aaPredicted RBP4.33□□□□□ -1.72
UBR1-205ENST00000564540 CLPTM1O96005 669 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 FRMD6-AS1P0C7T7 363 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 ITGA3P26006 1051 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 SUOXP51687 545 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 DDX10Q13206 875 aaKnown RBP4.33□□□□□ -1.72
UBR1-205ENST00000564540 ZFP69Q49AA0 526 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 ZNF772Q68DY9 489 aaPredicted RBP4.33□□□□□ -1.72
UBR1-205ENST00000564540 ADALQ6DHV7 355 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 FAM109BQ6ICB4 259 aaPredicted RBP4.33□□□□□ -1.72
UBR1-205ENST00000564540 GALNT5Q7Z7M9 940 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 DNAJC22Q8N4W6 341 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 TTC39CQ8N584 583 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 OLIG1Q8TAK6 271 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 HCAR2Q8TDS4 363 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 TMEM143Q96AN5 459 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 ART5Q96L15 291 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 ZNF599Q96NL3 588 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 ASCL2Q99929 193 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 FGF22Q9HCT0 170 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 C2orf42Q9NWW7 574 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 TAS2R14Q9NYV8 317 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 COQ3Q9NZJ6 369 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 NPAP1Q9NZP6 1156 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 CACNG5Q9UF02 275 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 RABGAP1Q9Y3P9 1069 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
UBR1-205ENST00000564540 SPIN1Q9Y657 262 aaPredicted RBP4.33□□□□□ -1.72
UBR1-205ENST00000564540 PRSS51A0A1B0GVH4 220 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 PTP4A3O75365 173 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 PLA2G4BP0C869 781 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 MMP9P14780 707 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 PRLRP16471 622 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 TAF6P49848 677 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 RPS18P62269 152 aaKnown RBP4.32□□□□□ -1.72
UBR1-205ENST00000564540 SNRPEP62304 92 aaKnown RBP4.32□□□□□ -1.72
UBR1-205ENST00000564540 PLA2G7Q13093 441 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 ITGA9Q13797 1035 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 KCNC3Q14003 757 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 IRF3Q14653 427 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 CORO6Q6QEF8 472 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 RSRC2Q7L4I2 434 aaKnown RBP4.32□□□□□ -1.72
UBR1-205ENST00000564540 TBC1D1Q86TI0 1168 aaPredicted RBP4.32□□□□□ -1.72
UBR1-205ENST00000564540 ADGRF2Q8IZF7 708 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 ZNF383Q8NA42 475 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 DDHD1Q8NEL9 900 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 PPHLN1Q8NEY8 458 aaKnown RBP4.32□□□□□ -1.72
UBR1-205ENST00000564540 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 FAM81BQ96LP2 452 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 ZNF71Q9NQZ8 489 aaPredicted RBP4.32□□□□□ -1.72
UBR1-205ENST00000564540 SLC7A7Q9UM01 511 aa4.32□□□□□ -1.72
UBR1-205ENST00000564540 ZNF197O14709 1029 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 TO15178 435 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 EXTL3O43909 919 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 CEACAM8P31997 349 aaPredicted RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 CLK1P49759 484 aaKnown RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 MRPS5P82675 430 aaKnown RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 GTDC1Q4AE62 458 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 FAM98BQ52LJ0 330 aaKnown RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 MYPOPQ86VE0 399 aaPredicted RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 ZNF653Q96CK0 615 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 EVI5LQ96CN4 794 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 CEP295NLQ96MC4 621 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 RTP3Q9BQQ7 232 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 TRAF4Q9BUZ4 470 aaPredicted RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 ABHD6Q9BV23 337 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 HHATLQ9HCP6 504 aa4.31□□□□□ -1.72
UBR1-205ENST00000564540 AMACRQ9UHK6 382 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms