RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 TRIP6Q15654 476 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF284Q2VY69 593 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 KIAA0895LQ68EN5 471 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 PTRHD1Q6GMV3 140 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 C16orf46Q6P387 395 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF549Q6P9A3 640 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 DBX2Q6ZNG2 339 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 OTOAQ7RTW8 1153 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 TSPAN33Q86UF1 283 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 SERPINA9Q86WD7 417 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 WDR75Q8IWA0 830 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 PIANPQ8IYJ0 282 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 PLD6Q8N2A8 252 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 KDF1Q8NAX2 398 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 ACVR1CQ8NER5 493 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 EID2BQ96D98 161 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 BIRC8Q96P09 236 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 PANX3Q96QZ0 392 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 COPS8Q99627 209 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 DERL2Q9GZP9 239 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 P2RY12Q9H244 342 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 C12orf65Q9H3J6 166 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 RABEP2Q9H5N1 569 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 STN1Q9H668 368 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 PCDH12Q9NPG4 1184 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 TM7SF3Q9NS93 570 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 OXSMQ9NWU1 459 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 ZDHHC3Q9NYG2 299 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 NCKIPSDQ9NZQ3 722 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 KLHL42Q9P2K6 505 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 XPR1Q9UBH6 696 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 SUSD2Q9UGT4 822 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 PPM1HQ9ULR3 514 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 OAS3Q9Y6K5 1087 aaKnown RBP9.61□□□□□ -0.87
UBFD1-203ENST00000564106 USH1CQ9Y6N9 552 aa9.61□□□□□ -0.87
UBFD1-203ENST00000564106 GOLGA4Q13439 2230 aaKnown RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 FAM221BA6H8Z2 402 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 G3V2L1 256 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 TK2O00142 265 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 EIF3FO00303 357 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 GAPDHSO14556 408 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 KPNA5O15131 536 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 MAGEC1O60732 1142 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 SMIM24O75264 130 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 SNNO75324 88 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 RNASEH2AO75792 299 aaKnown RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 DKK1O94907 266 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 WISP3O95389 354 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 C1SP09871 688 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 GNSP15586 552 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 TIMP2P16035 220 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 CD27P26842 260 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 FMO4P31512 558 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 RGS4P49798 205 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 DNAJB13P59910 316 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 IL2P60568 153 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 OCRLQ01968 901 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 PTSQ03393 145 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF460Q14592 562 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 TTLL9Q3SXZ7 439 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 TECRLQ5HYJ1 363 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF765Q7L2R6 523 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 PARS2Q7L3T8 475 aaKnown RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 PIWIL4Q7Z3Z4 852 aaKnown RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 RABEPKQ7Z6M1 372 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 GATAD2AQ86YP4 633 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 TRAM1L1Q8N609 369 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 GPR26Q8NDV2 337 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 STAG3L4Q8TBR4 150 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 FAM131CQ96AQ9 280 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 ARRDC3Q96B67 414 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 NXNL1Q96CM4 212 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 VPS35Q96QK1 796 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 SMIM14Q96QK8 99 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 MECRQ9BV79 373 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 HDAC8Q9BY41 377 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 FAM83DQ9H4H8 585 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 SLC32A1Q9H598 525 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 TFB2MQ9H5Q4 396 aaKnown RBP9.6□□□□□ -0.87
UBFD1-203ENST00000564106 SLCO1B3Q9NPD5 702 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 IGSF5Q9NSI5 407 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 MSRB2Q9Y3D2 182 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 NEUROG3Q9Y4Z2 214 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 IGSF10Q6WRI0 2623 aa9.6□□□□□ -0.87
UBFD1-203ENST00000564106 LOC400499M0QZD8 3231 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 IGLV3-16A0A075B6K0 115 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 A0A1W2PPC4 97 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 FAM149AA5PLN7 773 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 TARM1B6A8C7 271 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 NEMP1O14524 444 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 AP2A2O94973 939 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 F7P08709 466 aaPredicted RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 OR56A5P0C7T3 313 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 TPBGLP0DKB5 382 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CBSLP0DN79 551 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 FGF3P11487 239 aaPredicted RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ADRB3P13945 408 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms