RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CCDC78A2IDD5 438 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 SLC9B1P1A6NJY1 282 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 PRSS44E7EML9 344 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 ALOX12BO75342 701 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 SLC4A1P02730 911 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 FTLP02792 175 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-204ENST00000563739 STSP08842 583 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 MSL3P1P0C860 447 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CBSLP0DN79 551 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 FERP16591 822 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 ITGAXP20702 1163 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CCNCP24863 283 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CBSP35520 551 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 GCGRP47871 477 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 LMAN1P49257 510 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 ZNF165P49910 485 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 TDGF1P3P51864 188 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 TMEM115Q12893 351 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-204ENST00000563739 ZNF658BQ4V348 819 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-204ENST00000563739 BOLA3Q53S33 107 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 ZNF324BQ6AW86 544 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CAVIN1Q6NZI2 390 aaKnown RBP10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CYB5D1Q6P9G0 228 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 IGFL2Q6UWQ7 119 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 TRAPPC5Q8IUR0 188 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 NDUFAF2Q8N183 169 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 OR8K5Q8NH50 307 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 GRHL3Q8TE85 626 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CPT1BQ92523 772 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 POM121Q96HA1 1249 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 MESP1Q9BRJ9 268 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 CEP41Q9BYV8 373 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 PITPNM3Q9BZ71 974 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 SLC22A11Q9NSA0 550 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 HRASLS2Q9NWW9 162 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 TTLL3Q9Y4R7 772 aa10.07□□□□□ -0.8
SF3B3-204ENST00000563739 OR6C74A6NCV1 312 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 LRRC53A6NM62 1247 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 TMEM150CB9EJG8 249 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 KCNK1O00180 336 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 BTN3A3O00478 584 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 PVRP15151 417 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 ITGA3P26006 1051 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 OTX2P32243 289 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 TSFMP43897 325 aaKnown RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 IFI35P80217 286 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 CDSNQ15517 529 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 ZIC1Q15915 447 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 STX1AQ16623 288 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 HIF1AQ16665 826 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 IFI16Q16666 785 aaKnown RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 KYNUQ16719 465 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 SKOR2Q2VWA4 1001 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 CDHR3Q6ZTQ4 885 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 LRRC49Q8IUZ0 686 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 BEND7Q8N7W2 519 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 DDHD1Q8NEL9 900 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 NSMCE1Q8WV22 266 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 HDAC11Q96DB2 347 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 IMP4Q96G21 291 aaKnown RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 GBP5Q96PP8 586 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 ILKAPQ9H0C8 392 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 WWP1Q9H0M0 922 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 ISCUQ9H1K1 167 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 HAUS4Q9H6D7 363 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 KIR3DX1Q9H7L2 352 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 ACTR5Q9H9F9 607 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 MAGEE1Q9HCI5 957 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 FAM60AQ9NP50 221 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 BPIFA1Q9NP55 256 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 IL26Q9NPH9 171 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
SF3B3-204ENST00000563739 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
SF3B3-204ENST00000563739 UBA6A0AVT1 1052 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-204ENST00000563739 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A9O60656 530 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 POP7O75817 140 aaKnown RBP10.05□□□□□ -0.8
SF3B3-204ENST00000563739 GZMAP12544 262 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A6P19224 532 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 POLR2CP19387 275 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A1P22309 533 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 UGT1A4P22310 534 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 CES1P23141 567 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 DEKP35659 375 aaKnown RBP10.05□□□□□ -0.8
SF3B3-204ENST00000563739 PRKCIP41743 596 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 RRADP55042 308 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 TAS2R40P59535 323 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 PDE1BQ01064 536 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 FKBP15Q5T1M5 1219 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 METRNLQ641Q3 311 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 HGSNATQ68CP4 663 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 SASS6Q6UVJ0 657 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 FJX1Q86VR8 437 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 OOSP2Q86WS3 158 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 RAB43Q86YS6 212 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 CARFQ8N187 725 aa10.05□□□□□ -0.8
SF3B3-204ENST00000563739 PLD5Q8N7P1 536 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms