RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 KLRC2P26717 231 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 HMGN3Q15651 99 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CDONQ4KMG0 1287 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 BTN2A2Q8WVV5 523 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 TMBIM1Q969X1 311 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RADILQ96JH8 1075 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZNF641Q96N77 438 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 MTG2Q9H4K7 406 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CDHR5Q9HBB8 845 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 IRS2Q9Y4H2 1338 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 GLYATL1P3A0A0U1RQE8 302 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CLDN24A6NM45 220 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CAPN15O75808 1086 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SMIM18P0DKX4 95 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC2A4P14672 509 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CYP24A1Q07973 514 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 FGFBP1Q14512 234 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 DUSP7Q16829 419 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 EXOC3L2Q2M3D2 409 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 INTS6LQ5JSJ4 861 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 SH3PXD2AQ5TCZ1 1133 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SLC22A10Q63ZE4 541 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 NIPA1Q7RTP0 329 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZNF350Q9GZX5 532 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZSCAN32Q9NX65 697 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ANGPT4Q9Y264 503 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 TNRQ92752 1358 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L15C9J2P7 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L13C9JLJ4 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L11C9JVI0 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L18D6R9N7 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L22D6RA61 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L17D6RBQ6 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L19D6RCP7 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L20D6RJB6 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 E9PAM4 449 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 NCF1P14598 390 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 FOXO4P98177 505 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L24Q0WX57 530 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP17L6PQ6QN14 398 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 OR7G2Q8NG99 324 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SARS2Q9NP81 518 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 SIGLEC16A6NMB1 481 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ATE1O95260 518 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 MBP02144 154 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ITGB1P05556 798 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CYP2A7P20853 494 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SIM2Q14190 667 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 GRB14Q14449 540 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 EIF2S3LQ2VIR3 472 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 PLA2G4FQ68DD2 849 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 USP30Q70CQ3 517 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 TRIM48Q8IWZ4 208 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ANKEF1Q9NU02 776 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 RIMS3Q9UJD0 308 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 CNTNAP2Q9UHC6 1331 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 HEG1Q9ULI3 1381 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 XPNPEP2O43895 674 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 JUNBP17275 347 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZNF235Q14590 738 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 DCAF12L1Q5VU92 463 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 GCNT7Q6ZNI0 430 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 DNAJC10Q8IXB1 793 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 C7orf31Q8N865 590 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ZNF557Q8N988 423 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 IPMKQ8NFU5 416 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SAMD11Q96NU1 681 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 INIPQ9NRY2 104 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SNX6Q9UNH7 406 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 LMO7Q8WWI1 1683 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ISM1B1AKI9 464 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 PDCD5O14737 125 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 GCATO75600 419 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 GCP02774 474 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ERVK-10P10266 1014 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 RFX5P48382 616 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 HERVK_113P63132 956 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 PTGES3Q15185 160 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 ARL13AQ5H913 290 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 ANKRD22Q5VYY1 191 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 PAPD4Q6PIY7 484 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 C16orf86Q6ZW13 317 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 KCT2Q8NC54 265 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ARL11Q969Q4 196 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 GPRASP2Q96D09 838 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 PHF21BQ96EK2 531 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 SECISBP2Q96T21 854 aaKnown RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 AIF1LQ9BQI0 150 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 NEURL2Q9BR09 285 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 NT5C1AQ9BXI3 368 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 WDR55Q9H6Y2 383 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 RASSF1Q9NS23 344 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ABCD2Q9UBJ2 740 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 PADI2Q9Y2J8 665 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ADAM23O75077 832 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 ENTPD6O75354 484 aa6.18□□□□□ -1.42
CLK3-212ENST00000563418 MAFO75444 373 aaPredicted RBP6.18□□□□□ -1.42
CLK3-212ENST00000563418 RAD17O75943 681 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms