RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 NMBRP28336 390 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 NSG1P42857 185 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 ABCG1P45844 678 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 PRAMEP78395 509 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 CAPRIN2Q6IMN6 1127 aaKnown RBP27.66■■■□□ 2.02
NME3-203ENST00000563367 PACS1Q6VY07 963 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 AGBL5Q8NDL9 886 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 KCNE4Q8WWG9 221 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 CPT1BQ92523 772 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 RSC1A1Q92681 617 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 SGSM3Q96HU1 749 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 COG4Q9H9E3 785 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 OCIAD1Q9NX40 245 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 SDK2Q58EX2 2172 aa27.66■■■□□ 2.02
NME3-203ENST00000563367 MN1Q10571 1320 aaPredicted RBP27.66■■■□□ 2.02
NME3-203ENST00000563367 GOLGA6L10A0A0M3HER8 536 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 C9orf172C9J069 976 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 PRAMEF10O60809 474 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 AVILO75366 819 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 TMEM63AO94886 807 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 SLC35G4P0C7Q5 338 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 CSTF2P33240 577 aaKnown RBP eCLIP27.65■■■□□ 2.02
NME3-203ENST00000563367 TLE3Q04726 772 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 LYPLAL1Q5VWZ2 237 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 PLXDC1Q8IUK5 500 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 PMEPA1Q969W9 287 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.65■■■□□ 2.02
NME3-203ENST00000563367 FOXJ2Q9P0K8 574 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 RALYQ9UKM9 306 aaKnown RBP27.65■■■□□ 2.02
NME3-203ENST00000563367 LHX6Q9UPM6 363 aa27.65■■■□□ 2.02
NME3-203ENST00000563367 C9P02748 559 aa27.64■■■□□ 2.02
NME3-203ENST00000563367 LEPRP48357 1165 aaKnown RBP27.64■■■□□ 2.02
NME3-203ENST00000563367 FNTAP49354 379 aa27.64■■■□□ 2.02
NME3-203ENST00000563367 FASTKD1Q53R41 847 aaKnown RBP27.64■■■□□ 2.02
NME3-203ENST00000563367 PAPD7Q5XG87 772 aaKnown RBP27.64■■■□□ 2.02
NME3-203ENST00000563367 CES3Q6UWW8 571 aa27.64■■■□□ 2.02
NME3-203ENST00000563367 LDB1Q86U70 411 aaPredicted RBP27.64■■■□□ 2.02
NME3-203ENST00000563367 CAND1Q86VP6 1230 aaKnown RBP27.64■■■□□ 2.02
NME3-203ENST00000563367 KIFC1Q9BW19 673 aa27.64■■■□□ 2.02
NME3-203ENST00000563367 OR52A5Q9H2C5 316 aa27.64■■■□□ 2.02
NME3-203ENST00000563367 VPS37BQ9H9H4 285 aa27.64■■■□□ 2.02
NME3-203ENST00000563367 MARCH4Q9P2E8 410 aaPredicted RBP27.64■■■□□ 2.02
NME3-203ENST00000563367 CAPN5O15484 640 aaPredicted RBP27.63■■■□□ 2.01
NME3-203ENST00000563367 PDHA2P29803 388 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 CAPZBP47756 277 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 PREPP48147 710 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 CERS6Q6ZMG9 384 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 MPP5Q8N3R9 675 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 MFSD3Q96ES6 412 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 C9orf72Q96LT7 481 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 TGM7Q96PF1 710 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 DDX47Q9H0S4 455 aaKnown RBP27.63■■■□□ 2.01
NME3-203ENST00000563367 ACSL6Q9UKU0 697 aa27.63■■■□□ 2.01
NME3-203ENST00000563367 ZFYVE26Q68DK2 2539 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 EFCAB7A8K855 629 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 FANCGO15287 622 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 KLK10O43240 276 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 FAM129CQ86XR2 697 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 BMPERQ8N8U9 685 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 GRK7Q8WTQ7 553 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 ART4Q93070 314 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 CAPZA3Q96KX2 299 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 NAPGQ99747 312 aaPredicted RBP27.62■■■□□ 2.01
NME3-203ENST00000563367 MRM3Q9HC36 420 aaKnown RBP27.62■■■□□ 2.01
NME3-203ENST00000563367 CATSPERZQ9NTU4 200 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 SOX13Q9UN79 622 aa27.62■■■□□ 2.01
NME3-203ENST00000563367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.62■■■□□ 2.01
NME3-203ENST00000563367 CD3EAPO15446 510 aaKnown RBP27.61■■■□□ 2.01
NME3-203ENST00000563367 GSTM1P09488 218 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 ARNTP27540 789 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 PPP1CAP62136 330 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 SARNPP82979 210 aaKnown RBP27.61■■■□□ 2.01
NME3-203ENST00000563367 GSTM4Q03013 218 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 CLN3Q13286 438 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 NAPRTQ6XQN6 538 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 CREG2Q8IUH2 290 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 MCUQ8NE86 351 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 TAAR9Q96RI9 348 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 TTC1Q99614 292 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 DPH1Q9BZG8 443 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 SLC24A2Q9UI40 661 aa27.61■■■□□ 2.01
NME3-203ENST00000563367 B4E171 279 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 GOLGA8MH3BSY2 632 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 KIF1CO43896 1103 aaKnown RBP27.6■■■□□ 2.01
NME3-203ENST00000563367 FTH1P02794 183 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 TSPAN7P41732 249 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 PLCL1Q15111 1095 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 ZFAND4Q86XD8 727 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 ZFPM2Q8WW38 1151 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 ELMO1Q92556 727 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 TRIM56Q9BRZ2 755 aaKnown RBP27.6■■■□□ 2.01
NME3-203ENST00000563367 B3GNT4Q9C0J1 378 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 KIR3DX1Q9H7L2 352 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 SLC39A1Q9NY26 324 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 SSUH2Q9Y2M2 353 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 FAM208BQ5VWN6 2430 aa27.6■■■□□ 2.01
NME3-203ENST00000563367 QSOX1O00391 747 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 ANKRD34CP0C6C1 535 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 OR56A5P0C7T3 313 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 RPA4Q13156 261 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms