RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CRADDP78560 199 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 PTK6Q13882 451 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 NFE2L1Q14494 772 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 TGIF1Q15583 401 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 SEPT7Q16181 437 aaKnown RBP16.23■□□□□ 0.19
CDT1-202ENST00000562747 AMZ1Q400G9 498 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 MAP9Q49MG5 647 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 METRNLQ641Q3 311 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 PACS1Q6VY07 963 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 SYDE1Q6ZW31 735 aaPredicted RBP16.23■□□□□ 0.19
CDT1-202ENST00000562747 PIM3Q86V86 326 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 C17orf53Q8N3J3 647 aaPredicted RBP16.23■□□□□ 0.19
CDT1-202ENST00000562747 OR6P1Q8NGX9 317 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 CCNL2Q96S94 520 aaPredicted RBP16.23■□□□□ 0.19
CDT1-202ENST00000562747 DPYSL5Q9BPU6 564 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 VPS37BQ9H9H4 285 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 POT1Q9NUX5 634 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 SYBUQ9NX95 663 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 ZNF624Q9P2J8 865 aaPredicted RBP16.23■□□□□ 0.19
CDT1-202ENST00000562747 ACSL5Q9ULC5 683 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 ATXN7L1Q9ULK2 861 aaPredicted RBP16.23■□□□□ 0.19
CDT1-202ENST00000562747 SOX13Q9UN79 622 aa16.23■□□□□ 0.19
CDT1-202ENST00000562747 LILRA5A6NI73 299 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 VIPP01282 170 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 GSTM1P09488 218 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 CD1CP29017 333 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 CASQ1P31415 396 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 PPARGP37231 505 aaPredicted RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 SLC19A1P41440 591 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 PTGIRP43119 386 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 DRG2P55039 364 aaKnown RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 INHBCP55103 352 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 GSTM4Q03013 218 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 ZFP36L1Q07352 338 aaKnown RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 LINC00303Q3SY05 128 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 FASTKD1Q53R41 847 aaKnown RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 AARS2Q5JTZ9 985 aaKnown RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 FAM83HQ6ZRV2 1179 aaPredicted RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 MICALCLQ6ZW33 695 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 CAND1Q86VP6 1230 aaKnown RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 TRIM48Q8IWZ4 208 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 RBM12BQ8IXT5 1001 aaKnown RBP16.22■□□□□ 0.19
CDT1-202ENST00000562747 PPIL6Q8IXY8 311 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 NAT8LQ8N9F0 302 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 OR10G6Q8NH81 332 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 HM13Q8TCT9 377 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 SERPINB12Q96P63 405 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 STRADBQ9C0K7 418 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 EPB41L1Q9H4G0 881 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 WDR70Q9NW82 654 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 ASIC3Q9UHC3 531 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 ANAPC5Q9UJX4 755 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 WDR37Q9Y2I8 494 aa16.22■□□□□ 0.19
CDT1-202ENST00000562747 MAGEB16A2A368 324 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 DUX1O43812 170 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 WISP1O95388 367 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 NMBRP28336 390 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 EIF3IQ13347 325 aaKnown RBP16.21■□□□□ 0.19
CDT1-202ENST00000562747 CLCA4Q14CN2 919 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 RAB11FIP2Q7L804 512 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 PRICKLE2Q7Z3G6 844 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 PCGF5Q86SE9 256 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 ZNF761Q86XN6 746 aaPredicted RBP16.21■□□□□ 0.19
CDT1-202ENST00000562747 SLITRK4Q8IW52 837 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 KLHL7Q8IXQ5 586 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 FBXO39Q8N4B4 442 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 NAT14Q8WUY8 206 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 CXorf40BQ96DE9 158 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 AHCYL2Q96HN2 611 aaKnown RBP16.21■□□□□ 0.19
CDT1-202ENST00000562747 CCM2Q9BSQ5 444 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 TRIM4Q9C037 500 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 RDH14Q9HBH5 336 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.21■□□□□ 0.19
CDT1-202ENST00000562747 PCDHGA7Q9Y5G6 932 aa16.21■□□□□ 0.19
CDT1-202ENST00000562747 UNC13CQ8NB66 2214 aa16.21■□□□□ 0.18
CDT1-202ENST00000562747 BOD1L1Q8NFC6 3051 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 SDR42E2A6NKP2 422 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 OR52A4PA6NMU1 304 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 F8W8V4 182 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 AGRPO00253 132 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 DNALI1O14645 258 aaPredicted RBP16.2■□□□□ 0.18
CDT1-202ENST00000562747 AVILO75366 819 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 MAGEA3P43357 314 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 NFKB2Q00653 900 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 DR1Q01658 176 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 NFATC3Q12968 1075 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 RNASEH2BQ5TBB1 312 aaKnown RBP16.2■□□□□ 0.18
CDT1-202ENST00000562747 NKAIN2Q5VXU1 208 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 XKR5Q6UX68 686 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 SYT10Q6XYQ8 523 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 TMEM26Q6ZUK4 368 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 USP53Q70EK8 1073 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 TMPRSS9Q7Z410 1059 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 JAMLQ86YT9 394 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 CFAP206Q8IYR0 622 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 MPP5Q8N3R9 675 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 CLDN19Q8N6F1 224 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 OR4D9Q8NGE8 314 aa16.2■□□□□ 0.18
CDT1-202ENST00000562747 TMEM159Q96B96 161 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms