RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ASMTLO95671 621 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 EPB41P11171 864 aaKnown RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 KRT5P13647 590 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ACP5P13686 325 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 F3P13726 295 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 DNASE1P24855 282 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SERPINA4P29622 427 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ETV3P41162 512 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 GPR1P46091 355 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 CAPZBP47756 277 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 MAPKAPK2P49137 400 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SULT1E1P49888 294 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 POLR2LP62875 67 aaKnown RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 TUBB4BP68371 445 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 PPP2R2BQ00005 443 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 PAK1Q13153 545 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 TUBB2AQ13885 445 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SSPNQ14714 243 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 NCF4Q15080 339 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 PCOLCEQ15113 449 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 GPR19Q15760 415 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 C3AR1Q16581 482 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 CYP2A13Q16696 494 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 INO80DQ53TQ3 878 aaPredicted RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 PRAMEF17Q5VTA0 474 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 AGAP7PQ5VUJ5 663 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 OTUD1Q5VV17 481 aaPredicted RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 CES4AQ5XG92 561 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ZNF324BQ6AW86 544 aaPredicted RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 FAM198BQ6UWH4 519 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 CERS6Q6ZMG9 384 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ATG4DQ86TL0 474 aaPredicted RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 RELL1Q8IUW5 271 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SYTL1Q8IYJ3 562 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 GRAMD1CQ8IYS0 662 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ACBD4Q8NC06 268 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 PHC3Q8NDX5 983 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 WFDC11Q8NEX6 87 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 OR1N1Q8NGS0 311 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ADAMTS18Q8TE60 1221 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 CA5BP1Q8WTZ4 195 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 CASKIN2Q8WXE0 1202 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 CPT1BQ92523 772 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 UBXN4Q92575 508 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 RSC1A1Q92681 617 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 KAT5Q92993 513 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SLC41A2Q96JW4 573 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 LRFN5Q96NI6 719 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 NT5C1BQ96P26 610 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 AGAP4Q96P64 663 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ALPK1Q96QP1 1244 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 TUBGCP5Q96RT8 1024 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 NDC1Q9BTX1 674 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 TUBB2BQ9BVA1 445 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 OSGEPL1Q9H4B0 414 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 EPS8L2Q9H6S3 715 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ATP13A3Q9H7F0 1226 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 UCK1Q9HA47 277 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 P4HTMQ9NXG6 502 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 PPARGC1AQ9UBK2 798 aaKnown RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 LHX3Q9UBR4 397 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 B4GALT6Q9UBX8 382 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SEC14L3Q9UDX4 400 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 ST6GALNAC2Q9UJ37 374 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 TINAGQ9UJW2 476 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 STAP1Q9ULZ2 295 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SMC3Q9UQE7 1217 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 PLEKHA6Q9Y2H5 1048 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 COQ4Q9Y3A0 265 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 INTS1Q8N201 2190 aaKnown RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 POLR2DO15514 142 aaKnown RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 LY6G6DO95868 133 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 JCHAINP01591 159 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 CAPN1P07384 714 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 TEAD1P28347 426 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 HADHAP40939 763 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 SOX8P57073 446 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 PPP1CAP62136 330 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 UBE2IP63279 158 aaKnown RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 HSD11B2P80365 405 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 TAGLNQ01995 201 aaKnown RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 BCL2L1Q07817 233 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 AIMP2Q13155 320 aaKnown RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 MYBPHQ13203 477 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 SLC39A14Q15043 492 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 CYTH1Q15438 398 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 CNGA3Q16281 694 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 NFIL3Q16649 462 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 PTCHD3Q3KNS1 767 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 MLIPQ5VWP3 458 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 OGFOD2Q6N063 350 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 RPUSD3Q6P087 351 aaKnown RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 FAM173BQ6P4H8 233 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 OLFML1Q6UWY5 402 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 C11orf57Q6ZUT1 292 aaPredicted RBP5.17□□□□□ -1.58
HERC1-213ENST00000561359 Q6ZVL8 140 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 FAM183BPQ6ZVS7 135 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 HSD11B1LQ7Z5J1 315 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 TECPR1Q7Z6L1 1165 aa5.17□□□□□ -1.58
HERC1-213ENST00000561359 PHYKPLQ8IUZ5 450 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms