RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NTRK1P04629 796 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 FDXRP22570 491 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 ERVK-8P63133 956 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 NRG1Q02297 640 aaPredicted RBP16.26■□□□□ 0.19
TPM1-228ENST00000560975 FAM209AQ5JX71 171 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 SLC27A1Q6PCB7 646 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 DET1Q7L5Y6 550 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 CCDC117Q8IWD4 279 aaPredicted RBP16.26■□□□□ 0.19
TPM1-228ENST00000560975 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 KLHL5Q96PQ7 755 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 BARD1Q99728 777 aaKnown RBP16.26■□□□□ 0.19
TPM1-228ENST00000560975 MYOCQ99972 504 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 BRINP2Q9C0B6 783 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 USE1Q9NZ43 259 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 VAPAQ9P0L0 249 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.26■□□□□ 0.19
TPM1-228ENST00000560975 OSGIN1Q9UJX0 560 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 UBA6A0AVT1 1052 aaPredicted RBP16.26■□□□□ 0.19
TPM1-228ENST00000560975 ISPDA4D126 451 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 ASB14A6NK59 587 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 SLC2A3P11169 496 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 G6PDP11413 515 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 GRIK1P39086 918 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 TRAF3Q13114 568 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 SVOPLQ8N434 492 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 ZNF599Q96NL3 588 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 CYP2S1Q96SQ9 504 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 RASSF1Q9NS23 344 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 TPRKBQ9Y3C4 175 aa16.26■□□□□ 0.19
TPM1-228ENST00000560975 M0QX08 132 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 CDC7O00311 574 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 ECI2O75521 394 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 OR4F21O95013 312 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 ACVR2AP27037 513 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 LILRA4P59901 499 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 SEMA3AQ14563 771 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 ZNF404Q494X3 552 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 SYT6Q5T7P8 510 aaPredicted RBP16.25■□□□□ 0.19
TPM1-228ENST00000560975 CES5AQ6NT32 575 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 KDELC1Q6UW63 502 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 METTL4Q8N3J2 472 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 ZMIZ2Q8NF64 920 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 TP53INP1Q96A56 240 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 BCL7BQ9BQE9 202 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 REXO4Q9GZR2 422 aaKnown RBP16.25■□□□□ 0.19
TPM1-228ENST00000560975 IKZF5Q9H5V7 419 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 CRTAC1Q9NQ79 661 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 SCN3BQ9NY72 215 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 ZIM2Q9NZV7 527 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 UGT2A1Q9Y4X1 527 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 N6AMT1Q9Y5N5 214 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 FAM20BO75063 409 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 MOCS2O96007 188 aaPredicted RBP16.25■□□□□ 0.19
TPM1-228ENST00000560975 F9P00740 461 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 PIRTP0C851 137 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 RYKP34925 604 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 SLC26A3P40879 764 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 SLC35A2P78381 396 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 MRPS15P82914 257 aaKnown RBP16.25■□□□□ 0.19
TPM1-228ENST00000560975 OR5K1Q8NHB7 308 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 GIPC2Q8TF65 315 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 UBE2FQ969M7 185 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 YME1L1Q96TA2 773 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 MFSD1Q9H3U5 465 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 ACOT13Q9NPJ3 140 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-228ENST00000560975 PCDHGB1Q9Y5G3 927 aa16.25■□□□□ 0.19
TPM1-228ENST00000560975 MYBPHLA2RUH7 354 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 AGAP5A6NIR3 686 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 EIF3FO00303 357 aaPredicted RBP16.24■□□□□ 0.19
TPM1-228ENST00000560975 SLC7A4O43246 635 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 IGFBP5P24593 272 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 GGT5P36269 586 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 DSC2Q02487 901 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 ZNF181Q2M3W8 571 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 PAQR3Q6TCH7 311 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 GDPD3Q7L5L3 318 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 ADHFE1Q8IWW8 467 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 REXO5Q96IC2 774 aaKnown RBP16.24■□□□□ 0.19
TPM1-228ENST00000560975 DMRTB1Q96MA1 342 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 ASB1Q9Y576 335 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 KATNA1O75449 491 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 CD4P01730 458 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 CHRNB1P11230 501 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 FCGRTP55899 365 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 SV2CQ496J9 727 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 XKR7Q5GH72 579 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 PHACTR4Q8IZ21 702 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 VNN3Q9NY84 501 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 POLR3HQ9Y535 204 aaPredicted RBP16.24■□□□□ 0.19
TPM1-228ENST00000560975 DOCK1Q14185 1865 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 NPEPPSL1A6NEC2 478 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 RGS10O43665 173 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 PAPSS2O95340 614 aaPredicted RBP16.24■□□□□ 0.19
TPM1-228ENST00000560975 UROSP10746 265 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 HTR6P50406 440 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 GRIK2Q13002 908 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 E2F2Q14209 437 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 IHHQ14623 411 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms