RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ACTR1AP61163 376 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 DYNLT1P63172 113 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 GBE1Q04446 702 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 GALNT2Q10471 571 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 SRSF6Q13247 344 aaKnown RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 LY6DQ14210 128 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 TGIF1Q15583 401 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 ODF2Q5BJF6 829 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 FIGNQ5HY92 759 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 ALS2CLQ60I27 953 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 NCBP2-AS2Q69YL0 99 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 B4GALNT4Q76KP1 1039 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 VASH2Q86V25 355 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 NDUFAF2Q8N183 169 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 NIPA2Q8N8Q9 360 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 RCBTB1Q8NDN9 531 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 GPR156Q8NFN8 814 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 WDR48Q8TAF3 677 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 SYN2Q92777 582 aaPredicted RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 LCORQ96JN0 433 aaPredicted RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 ZNF830Q96NB3 372 aaPredicted RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 TMEM74Q96NL1 305 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 OR2M4Q96R27 311 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 SYT3Q9BQG1 590 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 TRIM8Q9BZR9 551 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 POLR1EQ9GZS1 481 aaKnown RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 HEY1Q9Y5J3 304 aa7.28□□□□□ -1.24
SPG11-213ENST00000558988 ARHGEF17Q96PE2 2063 aaPredicted RBP7.28□□□□□ -1.24
SPG11-213ENST00000558988 DMXL2Q8TDJ6 3036 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PRAMEF33A0A0G2JMD5 474 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 C1orf232A0A0U1RR37 186 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 A0A1W2PQ67 120 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 CFAP69A5D8W1 941 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 CDRT15L2A8MXV6 281 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 PYCARD-AS1I3L0S3 204 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 KCNK1O00180 336 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 SNX2O60749 519 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PRAMEF10O60809 474 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 C1QL1O75973 258 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PROSCO94903 275 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 CLDN7O95471 211 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 JCHAINP01591 159 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 FUCA1P04066 466 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ATP1A1P05023 1023 aaKnown RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 ITGA2BP08514 1039 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 TPM1P09493 284 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 H2AFZP0C0S5 128 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PIRTP0C851 137 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 GLI4P10075 376 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ZNF16P17020 682 aaPredicted RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 IL4RP24394 825 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 TRIM23P36406 574 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ADCY8P40145 1251 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ETV5P41161 510 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 CD86P42081 329 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 CFHR1Q03591 330 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 AP1B1Q10567 949 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 GALNT3Q14435 633 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 HLTFQ14527 1009 aaKnown RBP eCLIP7.27□□□□□ -1.25
SPG11-213ENST00000558988 LLGL1Q15334 1064 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ANKRD20A8PQ5CZ79 823 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 SNAP47Q5SQN1 464 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 NKAIN2Q5VXU1 208 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 TIGD7Q6NT04 549 aaPredicted RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 H2AFVQ71UI9 128 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 TMPRSS9Q7Z410 1059 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PIM3Q86V86 326 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ZFAND4Q86XD8 727 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 MAP7D3Q8IWC1 876 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 SCUBE1Q8IWY4 988 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 AMER2Q8N7J2 671 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 OR6C4Q8NGE1 309 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PIH1D2Q8WWB5 315 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 RAPGEF5Q92565 580 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 USP7Q93009 1102 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 GRAMD1AQ96CP6 724 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 RNF31Q96EP0 1072 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 SCRN2Q96FV2 425 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 AGAP2Q99490 1192 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 NUDT22Q9BRQ3 303 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 RIOK2Q9BVS4 552 aaKnown RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 TEX101Q9BY14 249 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 FRMD8Q9BZ67 464 aaPredicted RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 BRD8Q9H0E9 1235 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 CDH19Q9H159 772 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ABCG8Q9H221 673 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ARFGAP3Q9NP61 516 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 SPTLC3Q9NUV7 552 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 ZNHIT6Q9NWK9 470 aaKnown RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 RCOR3Q9P2K3 495 aaPredicted RBP7.27□□□□□ -1.25
SPG11-213ENST00000558988 ZNHIT2Q9UHR6 403 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 HYOU1Q9Y4L1 999 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 PCDHGA8Q9Y5G5 932 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.27□□□□□ -1.25
SPG11-213ENST00000558988 BAHCC1Q9P281 2608 aa7.27□□□□□ -1.25
SPG11-213ENST00000558988 SPEGQ15772 3267 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms