RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ASPRV1Q53RT3 343 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 C1QTNF12Q5T7M4 302 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 DCLRE1AQ6PJP8 1040 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 MSANTD1Q6ZTZ1 278 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 C11orf57Q6ZUT1 292 aaPredicted RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 FAM47EQ6ZV65 393 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 Q75L30 129 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 CCAR2Q8N163 923 aaKnown RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 PGBD5Q8N414 524 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 ELP5Q8TE02 316 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 PHF21AQ96BD5 680 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 NXNL1Q96CM4 212 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 TMEM19Q96HH6 336 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 FAM84BQ96KN1 310 aaPredicted RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 PRMT6Q96LA8 375 aaPredicted RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 FAM81BQ96LP2 452 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 SFXN2Q96NB2 322 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 FNBP1Q96RU3 617 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 MGME1Q9BQP7 344 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 ABHD6Q9BV23 337 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 THUMPD3Q9BV44 507 aaKnown RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 RSPH9Q9H1X1 276 aaPredicted RBP4.27□□□□□ -1.73
CASC4-206ENST00000558847 LRMDAQ9H2I8 198 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 TCP11L1Q9NUJ3 509 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 MRGBPQ9NV56 204 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 TMEM30AQ9NV96 361 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 LIPGQ9Y5X9 500 aa4.27□□□□□ -1.73
CASC4-206ENST00000558847 A0A087WV48 116 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 ELOVL7A1L3X0 281 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 CLDN4O14493 209 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 MID1O15344 667 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 INSIG1O15503 277 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 DIAPH2O60879 1101 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 SIX3O95343 332 aaPredicted RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 BMP10O95393 424 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 RAB40ALP0C0E4 278 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 OR2T7P0C7T2 308 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 LINC00271P0C7V0 271 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 FAM106CPP0CH98 169 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 FCGR1AP12314 374 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 CORO1AP31146 461 aaKnown RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 AMPHP49418 695 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 NPY4RP50391 375 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 CD81P60033 236 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 TUBA1BP68363 451 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 MYBPHQ13203 477 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 PPIGQ13427 754 aaKnown RBP eCLIP4.26□□□□□ -1.73
CASC4-206ENST00000558847 ZNF273Q14593 569 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 VWC2Q2TAL6 325 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 RAB6CQ53S08 254 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 ODF2Q5BJF6 829 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 RNASEH2BQ5TBB1 312 aaKnown RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 ZNF549Q6P9A3 640 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 MOXD1Q6UVY6 613 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 TIGD4Q8IY51 512 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 ZNF34Q8IZ26 560 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 C1orf87Q8N0U7 546 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 PELI3Q8N2H9 469 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 IQCF1Q8N6M8 205 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 RBMXL3Q8N7X1 1067 aaKnown RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 GOT1L1Q8NHS2 421 aaPredicted RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 SLC44A1Q8WWI5 657 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 ASB5Q8WWX0 329 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 LINC00615Q96LM1 132 aaPredicted RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 JAKMIP1Q96N16 626 aaKnown RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 CAMK1GQ96NX5 476 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 CSF3RQ99062 836 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 TMEM204Q9BSN7 226 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 LMF2Q9BU23 707 aaKnown RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 FNDC11Q9BVV2 318 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 RAB6CQ9H0N0 254 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 UBTD1Q9HAC8 227 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 PRMT7Q9NVM4 692 aaPredicted RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 CPSF3Q9UKF6 684 aaKnown RBP4.26□□□□□ -1.73
CASC4-206ENST00000558847 PRAG1Q86YV5 1406 aa4.26□□□□□ -1.73
CASC4-206ENST00000558847 HTR3EA5X5Y0 456 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 PI4K2BG5E9Z4 385 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZNHIT1O43257 154 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 XRCC3O43542 346 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 KDM4BO94953 1096 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 SLCO2B1O94956 709 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 CELF2O95319 508 aaKnown RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 SLU7O95391 586 aaKnown RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 H1F0P07305 194 aaKnown RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 CASTP20810 708 aaKnown RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 MUTP22033 750 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 HOXC13P31276 330 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 GABRA5P31644 462 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 COG7P83436 770 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 BNC1Q01954 994 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 SFMBT2Q5VUG0 894 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 KLC3Q6P597 504 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 RHBDF2Q6PJF5 856 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms